8Q05

Chlorella sorokiniana Rubisco with CsLinker (alpha3-alpha4) bound: D4 symmetry expanded

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N)	Ribulose bisphosphate carboxylase large chain, N-terminal domain	The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold.	Domain
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large)	Ribulose bisphosphate carboxylase large chain, catalytic domain	The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold.	Domain
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	PF00101	Ribulose bisphosphate carboxylase, small chain (RuBisCO_small)	Ribulose bisphosphate carboxylase, small chain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth Z]	CsLinker (alpha3-alpha4)	-	-	-
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	Ribulose bisphosphate carboxylase large chain	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding ribulose-bisphosphate carboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity monooxygenase activity oxidoreductase activity	cellular metabolic process metabolic process cellular process cellular metabolic compound salvage photorespiration carbohydrate metabolic process photosynthesis carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process biosynthetic process reductive pentose-phosphate cycle carbon fixation	membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle chloroplast
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	Ribulose bisphosphate carboxylase small subunit, chloroplastic	ribulose-bisphosphate carboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity L-amino acid transmembrane transporter activity amino acid transmembrane transporter activity transporter activity carboxylic acid transmembrane transporter activity organic acid transmembrane transporter activity transmembrane transporter activity organic anion transmembrane transporter activity	cellular metabolic process metabolic process cellular process cellular metabolic compound salvage photorespiration carbohydrate metabolic process photosynthesis carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process biosynthetic process reductive pentose-phosphate cycle carbon fixation	membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	IPR020888	Ribulose bisphosphate carboxylase large subunit, type I	Family
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	Homologous Superfamily
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	IPR020878	Ribulose bisphosphate carboxylase, large chain, active site	Active Site
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	Domain
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	IPR033966	RuBisCO	Family
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	Domain
B [auth A], D [auth C], F, H [auth I], J [auth L], B [auth A], D [auth C], F, H [auth I], J [auth L], L [auth O], N [auth S], P [auth W]	IPR036422	RuBisCO large subunit, N-terminal domain superfamily	Homologous Superfamily
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	IPR013766	Thioredoxin domain	Domain
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	IPR000894	Ribulose bisphosphate carboxylase small subunit, domain	Domain
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	IPR036385	Ribulose bisphosphate carboxylase, small subunit superfamily	Homologous Superfamily
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	IPR024681	Ribulose bisphosphate carboxylase, small subunit	Family
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	IPR013057	Amino acid transporter, transmembrane domain	Domain
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	IPR017937	Thioredoxin, conserved site	Conserved Site
C [auth P], E [auth D], G, I [auth J], K [auth M], C [auth P], E [auth D], G, I [auth J], K [auth M], M [auth Q], O [auth T], Q [auth X]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.