8PC1
Sub-tomogram average of the closed conformation of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | PF19342 | e8pc1A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: C-domain of Mg adhesin P110 (From Topology) | T: C-domain of Mg adhesin P110 | F: PF19342 | ECOD (1.6) |
B [auth A] | PF05220 | e8pc1A2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF05220 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF12378 | Mycoplasma adhesin P1, N-terminal (P1_N) | Mycoplasma adhesin P1, N-terminal | - | Repeat |
A [auth B] | PF03257 | Mycoplasma adhesin P1, C-terminal (Adhesin_P1_C) | Mycoplasma adhesin P1, C-terminal | This domain is found towards the C-terminal of adhesins from Mycoplasmas, such as adhesin P1, first identified as the major determinant for cytoadherence and gliding motility in M. pneumoniae. P1 forms a transmembrane adhesion complex with P40/P90, c ... | Domain |
B [auth A] | PF19342 | MGP3 C-terminal domain (MGP3_C) | MGP3 C-terminal domain | This entry represents the C-terminal domain from the Mycoplasma genitalium p110 adhesin protein. This domain has an Ig fold [1]. It is adjacent to the membrane. This domain contains a bound potassium ion [1]. | Domain |
B [auth A] | PF05220 | MgpC adhesin (MgpC) | MgpC adhesin | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B] | Adhesin P1 | - | ||
B [auth A] | Mgp-operon protein 3 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR022400 | Adhesin P1 | Family |
A [auth B] | IPR004940 | Adhesin P1, C-terminal domain | Domain |
A [auth B] | IPR022116 | Adhesin P1, N-terminal | Domain |
B [auth A] | IPR045839 | Mgp-operon protein 3, C-terminal domain | Domain |
B [auth A] | IPR007885 | MgpC adhesin | Family |