8PBY
Single particle cryo-EM of the P140-P110 heterodimer with an alternative conformation in the P140 stalk of Mycoplasma genitalium at a resolution of 3.7 Angstrom.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF19342 | e8pbyA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: C-domain of Mg adhesin P110 (From Topology) | T: C-domain of Mg adhesin P110 | F: PF19342 | ECOD (1.6) |
A | PF05220 | e8pbyA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF05220 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF19342 | MGP3 C-terminal domain (MGP3_C) | MGP3 C-terminal domain | This entry represents the C-terminal domain from the Mycoplasma genitalium p110 adhesin protein. This domain has an Ig fold [1]. It is adjacent to the membrane. This domain contains a bound potassium ion [1]. | Domain | |
PF05220 | MgpC adhesin (MgpC) | MgpC adhesin | - | Repeat | |
PF12378 | Mycoplasma adhesin P1, N-terminal (P1_N) | Mycoplasma adhesin P1, N-terminal | - | Repeat | |
PF03257 | Mycoplasma adhesin P1, C-terminal (Adhesin_P1_C) | Mycoplasma adhesin P1, C-terminal | This domain is found towards the C-terminal of adhesins from Mycoplasmas, such as adhesin P1, first identified as the major determinant for cytoadherence and gliding motility in M. pneumoniae. P1 forms a transmembrane adhesion complex with P40/P90, c ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Mgp-operon protein 3 | - | |||
Adhesin P1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR045839 | Mgp-operon protein 3, C-terminal domain | Domain | |
IPR007885 | MgpC adhesin | Family | |
IPR022400 | Adhesin P1 | Family | |
IPR004940 | Adhesin P1, C-terminal domain | Domain | |
IPR022116 | Adhesin P1, N-terminal | Domain |