8OZI

cryoEM structure of SPARTA complex pre-NAD cleavage

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	F_UNCLASSIFIED	e8oziB2	A: a/b three-layered sandwiches	X: Middle domain in Argonaute homologs (From Topology)	H: Middle domain in Argonaute homologs (From Topology)	T: Middle domain in Argonaute homologs	F: F_UNCLASSIFIED	ECOD (1.6)
B	F_UNCLASSIFIED	e8oziB1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: F_UNCLASSIFIED	ECOD (1.6)
F [auth D]	F_UNCLASSIFIED	e8oziD2	A: a/b three-layered sandwiches	X: Middle domain in Argonaute homologs (From Topology)	H: Middle domain in Argonaute homologs (From Topology)	T: Middle domain in Argonaute homologs	F: F_UNCLASSIFIED	ECOD (1.6)
F [auth D]	F_UNCLASSIFIED	e8oziD1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: F_UNCLASSIFIED	ECOD (1.6)
J [auth F]	F_UNCLASSIFIED	e8oziF2	A: a/b three-layered sandwiches	X: Middle domain in Argonaute homologs (From Topology)	H: Middle domain in Argonaute homologs (From Topology)	T: Middle domain in Argonaute homologs	F: F_UNCLASSIFIED	ECOD (1.6)
J [auth F]	F_UNCLASSIFIED	e8oziF1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth H]	F_UNCLASSIFIED	e8oziH2	A: a/b three-layered sandwiches	X: Middle domain in Argonaute homologs (From Topology)	H: Middle domain in Argonaute homologs (From Topology)	T: Middle domain in Argonaute homologs	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth H]	F_UNCLASSIFIED	e8oziH1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: F_UNCLASSIFIED	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, E [auth C], I [auth E], K [auth G]	PF13676	TIR domain (TIR_2)	TIR domain	This is a family of Toll-like receptors.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, E [auth C], I [auth E], K [auth G]	TIR domain-containing protein	-	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction cell communication	-
B, F [auth D], J [auth F], L [auth H]	Piwi domain-containing protein	binding organic cyclic compound binding nucleic acid binding	-	-
C [auth I], G [auth K], M, N	RNA (5'-R(PUPUPUPUPUPUPUPUPUPUPUPUPUPUPUPUPUPU)-3')	-	-	-
D [auth J], H [auth L], O, P	DNA (5'-D(APAPAPAPAPAPAPAPAPAPAPAPAPAPAPA)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, E [auth C], I [auth E], K [auth G]	IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	Domain
A, E [auth C], I [auth E], K [auth G]	IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Homologous Superfamily
B, F [auth D], J [auth F], L [auth H]	IPR036397	Ribonuclease H superfamily	Homologous Superfamily
B, F [auth D], J [auth F], L [auth H]	IPR012337	Ribonuclease H-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.