8OVW

Cryo-EM structure of CBF1-CCAN bound topologically to centromeric DNA


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
N [auth W]F_UNCLASSIFIEDe8ovwW1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: F_UNCLASSIFIEDECOD (1.6)
G [auth L]F_UNCLASSIFIEDe8ovwL1 A: a+b two layersX: Recombination-associated protein rdgC (From Topology)H: Recombination-associated protein rdgC (From Topology)T: Recombination-associated protein rdgCF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00010Helix-loop-helix DNA-binding domain (HLH)Helix-loop-helix DNA-binding domain- Domain
P [auth Z]PF09447Cnl2/NKP2 family protein (Cnl2_NKP2)Cnl2/NKP2 family protein- Family
D [auth H]PF20993CENPH protein (CENPH)CENPH protein- Family
H [auth N]PF05238Kinetochore protein CHL4 like (CENP-N)Kinetochore protein CHL4 like- Family
I [auth O]PF09496Cenp-O kinetochore centromere component (CENP-O)Cenp-O kinetochore centromere component- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Centromere-binding protein 1
K [auth Q]Inner kinetochore subunit OKP1-
L [auth T]Inner kinetochore subunit CNN1
M [auth U]Inner kinetochore subunit AME1-
N [auth W]Inner kinetochore subunit WIP1
O [auth Y]Inner kinetochore subunit NKP1-
P [auth Z]Inner kinetochore subunit NKP2-
Q [auth E]C0N3 DNA---
C [auth D]C0N3 DNA---
D [auth H]Inner kinetochore subunit MCM16-
E [auth I]Inner kinetochore subunit CTF3-
F [auth K]Inner kinetochore subunit MCM22-
G [auth L]Inner kinetochore subunit IML3-
H [auth N]Inner kinetochore subunit CHL4
I [auth O]Inner kinetochore subunit MCM21-
J [auth P]Inner kinetochore subunit CTF19-