8K82

Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth SA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8061280 3001397 SCOP2B (2022-06-29)
K [auth SE]SCOP2B SuperfamilyNucleic acid-binding proteins 8052759 3000135 SCOP2B (2022-06-29)
K [auth SE]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052758 3001473 SCOP2B (2022-06-29)
K [auth SE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052760 3000334 SCOP2B (2022-06-29)
L [auth SF]SCOP2B SuperfamilyRibosomal protein S7 8065993 3000799 SCOP2B (2022-06-29)
M [auth SG]SCOP2B SuperfamilyGS N-terminal domain-like 8053173 3000408 SCOP2B (2022-06-29)
R [auth SL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052736 3002138 SCOP2B (2022-06-29)
R [auth SL]SCOP2B SuperfamilyNucleic acid-binding proteins 8052738 3000135 SCOP2B (2022-06-29)
S [auth SM]SCOP2B SuperfamilyL30e-like 8096946 3001739 SCOP2B (2022-06-29)
T [auth SN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052974 3001284 SCOP2B (2022-06-29)
T [auth SN]SCOP2B SuperfamilyHomeodomain-like 8052973 3000001 SCOP2B (2022-06-29)
U [auth SO]SCOP2B SuperfamilyTranslational machinery components 8095805 3000571 SCOP2B (2022-06-29)
V [auth SP]SCOP2B SuperfamilyRibosomal protein S19 8086076 3000686 SCOP2B (2022-06-29)
W [auth SQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8103366 3000100 SCOP2B (2022-06-29)
Y [auth SS]SCOP2B SuperfamilyS13-like H2TH domain 8098450 3000053 SCOP2B (2022-06-29)
AA [auth SU]SCOP2B SuperfamilyRibosomal protein S10 8098648 3001336 SCOP2B (2022-06-29)
BA [auth SV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053136 3000068 SCOP2B (2022-06-29)
GA [auth Sa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053149 3000068 SCOP2B (2022-06-29)
JA [auth Sd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052569 3000068 SCOP2B (2022-06-29)
PA [auth LC]SCOP2B SuperfamilyRibosomal protein L4 8052816 3001146 SCOP2B (2022-06-29)
PA [auth LC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052815 3002143 SCOP2B (2022-06-29)
QA [auth LD]SCOP2B SuperfamilyTranslational machinery components 8052875 3000571 SCOP2B (2022-06-29)
RA [auth LE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053109 3000334 SCOP2B (2022-06-29)
SA [auth LF]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8052917 3001378 SCOP2B (2022-06-29)
SA [auth LF]SCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052916 3002152 SCOP2B (2022-06-29)
TA [auth LG]SCOP2B SuperfamilyL30e-like 8063962 3001739 SCOP2B (2022-06-29)
WA [auth LJ]SCOP2B SuperfamilyRL5-like 8073884 3001709 SCOP2B (2022-06-29)
YA [auth LL]SCOP2B SuperfamilyRibosomal protein L13e-like 8053159 3002162 SCOP2B (2022-06-29)
AB [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082481 3000210 SCOP2B (2022-06-29)
CB [auth LP]SCOP2B SuperfamilyRibosomal protein L22 8076708 3001078 SCOP2B (2022-06-29)
DB [auth LQ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095970 3001045 SCOP2B (2022-06-29)
EB [auth LR]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8077485 3000890 SCOP2B (2022-06-29)
HB [auth LU]SCOP2B Superfamily60S Ribosomal protein L22e 8053058 3002158 SCOP2B (2022-06-29)
IB [auth LV]SCOP2B Superfamily50S Ribosomal protein L14-like 8103364 3000433 SCOP2B (2022-06-29)
KB [auth LX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095962 3000210 SCOP2B (2022-06-29)
MB [auth LZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053046 3000334 SCOP2B (2022-06-29)
NB [auth La]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8077127 3001045 SCOP2B (2022-06-29)
OB [auth Lb]SCOP2B SuperfamilyRibosomal protein L29e 8053045 3002157 SCOP2B (2022-06-29)
PB [auth Lc]SCOP2B SuperfamilyL30e-like 8039862 3001739 SCOP2B (2022-06-29)
SB [auth Lf]SCOP2B SuperfamilyTranslational proteins 8087451 3000811 SCOP2B (2022-06-29)
TB [auth Lg]SCOP2B SuperfamilyRibosomal protein L34e-like 8053547 3002203 SCOP2B (2022-06-29)
VB [auth Li]SCOP2B SuperfamilyRibosomal protein L36e 8053115 3002161 SCOP2B (2022-06-29)
WB [auth Lj]SCOP2B SuperfamilyZn-binding ribosomal proteins 8080044 3001320 SCOP2B (2022-06-29)
XB [auth Lk]SCOP2B SuperfamilyRibosomal L38e protein-like 8053562 3002206 SCOP2B (2022-06-29)
YB [auth Ll]SCOP2B SuperfamilyRibosomal protein L39e 8078549 3001756 SCOP2B (2022-06-29)
DC [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins 8103126 3001320 SCOP2B (2022-06-29)
EC [auth L1]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8098448 3001911 SCOP2B (2022-06-29)
O [auth SI]SCOP2B Superfamily50S Ribosomal protein L14-like 8053083 3000433 SCOP2B (2022-06-29)
Q [auth SK]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055713 3000034 SCOP2B (2022-06-29)
CA [auth SW]SCOP2B SuperfamilyRibosomal protein S8 8096922 3000709 SCOP2B (2022-06-29)
FA [auth SZ]SCOP2B SuperfamilyWinged helix DNA-binding domain 8059235 3000034 SCOP2B (2022-06-29)
IA [auth Sc]SCOP2B SuperfamilyNucleic acid-binding proteins 8063430 3000135 SCOP2B (2022-06-29)
KA [auth Se]SCOP2B SuperfamilyRibosomal protein S30e-like 8053451 3002190 SCOP2B (2022-06-29)
OA [auth LB]SCOP2B SuperfamilyTranslational proteins 8078363 3000811 SCOP2B (2022-06-29)
VA [auth LI]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8079407 3000884 SCOP2B (2022-06-29)
BB [auth LO]SCOP2B SuperfamilyRibosomal protein L13 8066053 3001134 SCOP2B (2022-06-29)
LB [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076760 3000334 SCOP2B (2022-06-29)
H [auth SB]SCOP2B SuperfamilyRibosomal S3Ae-like 8053211 3002166 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth SA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
J [auth SD]PF07650KH domain (KH_2)KH domain- Domain
J [auth SD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
J [auth SD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
K [auth SE]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
K [auth SE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
K [auth SE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
K [auth SE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
K [auth SE]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
K [auth SE]PF00467KOW motif (KOW)KOW motif- Family
L [auth SF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
M [auth SG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
M [auth SG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
N [auth SH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
R [auth SL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
R [auth SL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
S [auth SM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
T [auth SN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
U [auth SO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
V [auth SP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
W [auth SQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
Y [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
Z [auth ST]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
AA [auth SU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
BA [auth SV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
DA [auth SX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
PA [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
PA [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PA [auth LC]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
QA [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
QA [auth LD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
QA [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
RA [auth LE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
RA [auth LE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
SA [auth LF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
SA [auth LF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
TA [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
WA [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
WA [auth LJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
WA [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
XA [auth LK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
XA [auth LK]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
XA [auth LK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
YA [auth LL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
YA [auth LL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
ZA [auth LM]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
ZA [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
ZA [auth LM]PF00467KOW motif (KOW)KOW motif- Family
AB [auth LN]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
AB [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
CB [auth LP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CB [auth LP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
DB [auth LQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
EB [auth LR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
FB [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
IB [auth LV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
JB [auth LW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
KB [auth LX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
MB [auth LZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
EC [auth L1]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
GC [auth CN]PF04065Not1 N-terminal domain, CCR4-Not complex component (Not3)Not1 N-terminal domain, CCR4-Not complex component- Family
O [auth SI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
P [auth SJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
P [auth SJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
Q [auth SK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
CA [auth SW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
EA [auth SY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
NA [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
NA [auth LA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
NA [auth LA]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
OA [auth LB]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
UA [auth LH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
UA [auth LH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
VA [auth LI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
VA [auth LI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
BB [auth LO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
BB [auth LO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
LB [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
LB [auth LY]PF00467KOW motif (KOW)KOW motif- Family
AC [auth Ln],
BC [auth L2]
PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
H [auth SB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
FC [auth P0]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
FC [auth P0]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
I [auth SC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
I [auth SC]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
I [auth SC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C2]18S rRNA---
B [auth C7]mRNA---
C [auth C5]tRNA---
D [auth C1]23S rRNA---
F [auth C3]5.8S rRNA---
G [auth SA]Small ribosomal subunit protein uS2A
J [auth SD]Small ribosomal subunit protein uS3
K [auth SE]40S ribosomal protein S4-A
L [auth SF]Small ribosomal subunit protein uS7
M [auth SG]40S ribosomal protein S6-A
N [auth SH]40S ribosomal protein S7-A
R [auth SL]Small ribosomal subunit protein uS17A
S [auth SM]Small ribosomal subunit protein eS12
T [auth SN]40S ribosomal protein S13
U [auth SO]40S ribosomal protein S14-A
V [auth SP]Small ribosomal subunit protein uS19
W [auth SQ]Small ribosomal subunit protein uS9A
X [auth SR]Small ribosomal subunit protein eS17A
Y [auth SS]Small ribosomal subunit protein uS13A
Z [auth ST]Small ribosomal subunit protein eS19A
AA [auth SU]Small ribosomal subunit protein uS10
BA [auth SV]Small ribosomal subunit protein eS21A
DA [auth SX]40S ribosomal protein S23-A
GA [auth Sa]Small ribosomal subunit protein eS26B
HA [auth Sb]40S ribosomal protein S27-A
JA [auth Sd]Small ribosomal subunit protein uS14A
LA [auth Sf]Ubiquitin-ribosomal protein eS31 fusion protein
PA [auth LC]Large ribosomal subunit protein uL4A
QA [auth LD]Large ribosomal subunit protein uL18
RA [auth LE]Large ribosomal subunit protein eL6A
SA [auth LF]Large ribosomal subunit protein uL30A
TA [auth LG]Large ribosomal subunit protein eL8A
WA [auth LJ]Large ribosomal subunit protein uL5A
XA [auth LK]Large ribosomal subunit protein uL11A
YA [auth LL]Large ribosomal subunit protein eL13A
ZA [auth LM]Large ribosomal subunit protein eL14A
AB [auth LN]Large ribosomal subunit protein eL15A
CB [auth LP]Large ribosomal subunit protein uL22A
DB [auth LQ]Large ribosomal subunit protein eL18A
EB [auth LR]Large ribosomal subunit protein eL19A
FB [auth LS]Large ribosomal subunit protein eL20A
GB [auth LT]Large ribosomal subunit protein eL21A
HB [auth LU]Large ribosomal subunit protein eL22A
IB [auth LV]Large ribosomal subunit protein uL14A
JB [auth LW]Large ribosomal subunit protein eL24A
KB [auth LX]Large ribosomal subunit protein uL23
MB [auth LZ]Large ribosomal subunit protein eL27A
NB [auth La]Large ribosomal subunit protein uL15
OB [auth Lb]Large ribosomal subunit protein eL29
PB [auth Lc]Large ribosomal subunit protein eL30
RB [auth Le]Large ribosomal subunit protein eL32
SB [auth Lf]Large ribosomal subunit protein eL33A
TB [auth Lg]Large ribosomal subunit protein eL34A
VB [auth Li]Large ribosomal subunit protein eL36A
WB [auth Lj]Large ribosomal subunit protein eL37A
XB [auth Lk]Large ribosomal subunit protein eL38
YB [auth Ll]Large ribosomal subunit protein eL39
ZB [auth Lm]Ubiquitin-ribosomal protein eL40A fusion protein
CC [auth Lo]Large ribosomal subunit protein eL42A
DC [auth Lp]Large ribosomal subunit protein eL43A
EC [auth L1]Large ribosomal subunit protein uL1A
GC [auth CN]General negative regulator of transcription subunit 5-
O [auth SI]40S ribosomal protein S8-A
P [auth SJ]40S ribosomal protein S9-A
Q [auth SK]Small ribosomal subunit protein eS10A
CA [auth SW]40S ribosomal protein S22-A
EA [auth SY]40S ribosomal protein S24-A
FA [auth SZ]Small ribosomal subunit protein eS25A
IA [auth Sc]Small ribosomal subunit protein eS28A
KA [auth Se]40S ribosomal protein S30-A
MA [auth Sg]Small ribosomal subunit protein RACK1
NA [auth LA]Large ribosomal subunit protein uL2A
OA [auth LB]Large ribosomal subunit protein uL3
UA [auth LH]Large ribosomal subunit protein uL6A
VA [auth LI]Large ribosomal subunit protein uL16
E [auth C4]5S rRNA---
BB [auth LO]Large ribosomal subunit protein uL13A
LB [auth LY]Large ribosomal subunit protein uL24A
QB [auth Ld]Large ribosomal subunit protein eL31A
UB [auth Lh]Large ribosomal subunit protein uL29A
AC [auth Ln],
BC [auth L2]
Large ribosomal subunit protein eL41A
H [auth SB]40S ribosomal protein S1-A
FC [auth P0]Large ribosomal subunit protein uL10
I [auth SC]40S ribosomal protein S2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth SA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
G [auth SA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
G [auth SA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
G [auth SA]IPR001865Small ribosomal subunit protein uS2Family
G [auth SA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
J [auth SD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
J [auth SD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
J [auth SD]IPR004044K Homology domain, type 2Domain
J [auth SD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
J [auth SD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
J [auth SD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
J [auth SD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
K [auth SE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
K [auth SE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
K [auth SE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
K [auth SE]IPR002942RNA-binding S4 domainDomain
K [auth SE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
K [auth SE]IPR000876Small ribosomal subunit protein eS4Family
K [auth SE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth SE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
K [auth SE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
K [auth SE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
K [auth SE]IPR005824KOWDomain
L [auth SF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
L [auth SF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
L [auth SF]IPR000235Small ribosomal subunit protein uS7Family
L [auth SF]IPR023798Small ribosomal subunit protein uS7 domainDomain
L [auth SF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
M [auth SG]IPR014401Small ribosomal subunit protein eS6-likeFamily
M [auth SG]IPR001377Small ribosomal subunit protein eS6Family
M [auth SG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
N [auth SH]IPR000554Small ribosomal subunit protein eS7Family
N [auth SH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
R [auth SL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
R [auth SL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
R [auth SL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
R [auth SL]IPR000266Small ribosomal subunit protein uS17Family
R [auth SL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
S [auth SM]IPR000530Small ribosomal subunit protein eS12Family
S [auth SM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
S [auth SM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
S [auth SM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
T [auth SN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
T [auth SN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
T [auth SN]IPR000589Small ribosomal subunit protein uS15Family
T [auth SN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
U [auth SO]IPR001971Small ribosomal subunit protein uS11Family
U [auth SO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
U [auth SO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
V [auth SP]IPR002222Small ribosomal subunit protein uS19Family
V [auth SP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
V [auth SP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
V [auth SP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
W [auth SQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
W [auth SQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
W [auth SQ]IPR000754Small ribosomal subunit protein uS9Family
W [auth SQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
X [auth SR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
X [auth SR]IPR001210Small ribosomal subunit protein eS17Family
X [auth SR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
Y [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
Y [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
Y [auth SS]IPR001892Small ribosomal subunit protein uS13Family
Y [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
Z [auth ST]IPR001266Small ribosomal subunit protein eS19Family
Z [auth ST]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Z [auth ST]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
Z [auth ST]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
AA [auth SU]IPR001848Small ribosomal subunit protein uS10Family
AA [auth SU]IPR027486Small ribosomal subunit protein uS10 domainDomain
AA [auth SU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
AA [auth SU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
AA [auth SU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
BA [auth SV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
BA [auth SV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
BA [auth SV]IPR001931Small ribosomal subunit protein eS21Family
DA [auth SX]IPR006032Small ribosomal subunit protein uS12Family
DA [auth SX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DA [auth SX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
GA [auth Sa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
GA [auth Sa]IPR000892Small ribosomal subunit protein eS26Family
GA [auth Sa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
HA [auth Sb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
HA [auth Sb]IPR000592Small ribosomal subunit protein eS27Family
HA [auth Sb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JA [auth Sd]IPR001209Small ribosomal subunit protein uS14Family
JA [auth Sd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
JA [auth Sd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
JA [auth Sd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
LA [auth Sf]IPR019954Ubiquitin conserved siteConserved Site
LA [auth Sf]IPR000626Ubiquitin-like domainDomain
LA [auth Sf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
LA [auth Sf]IPR002906Small ribosomal subunit protein eS31Domain
LA [auth Sf]IPR019956Ubiquitin domainDomain
LA [auth Sf]IPR050158Ubiquitin and ubiquitin-likeFamily
LA [auth Sf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
LA [auth Sf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
PA [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
PA [auth LC]IPR002136Large ribosomal subunit protein uL4Family
PA [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
PA [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
PA [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
QA [auth LD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
QA [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
RA [auth LE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
RA [auth LE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth LE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
RA [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth LE]IPR000915Large ribosomal subunit protein eL6Family
SA [auth LF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
SA [auth LF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
SA [auth LF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
SA [auth LF]IPR039699Large ribosomal subunit protein uL30Family
SA [auth LF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
SA [auth LF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
SA [auth LF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
TA [auth LG]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
TA [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
TA [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
TA [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
TA [auth LG]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
TA [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
WA [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
WA [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
WA [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
WA [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
WA [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
XA [auth LK]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
XA [auth LK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
XA [auth LK]IPR000911Ribosomal protein uL11Family
XA [auth LK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
XA [auth LK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
XA [auth LK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
YA [auth LL]IPR001380Large ribosomal subunit protein eL13Family
YA [auth LL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
ZA [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
ZA [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
ZA [auth LM]IPR039660Large ribosomal subunit protein eL14Family
ZA [auth LM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
ZA [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
ZA [auth LM]IPR005824KOWDomain
AB [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AB [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
AB [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
AB [auth LN]IPR000439Large ribosomal subunit protein eL15Family
CB [auth LP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
CB [auth LP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
CB [auth LP]IPR001063Large ribosomal subunit protein uL22Family
CB [auth LP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
DB [auth LQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
DB [auth LQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
DB [auth LQ]IPR000039Large ribosomal subunit protein eL18Family
DB [auth LQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
EB [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
EB [auth LR]IPR039547Large ribosomal subunit protein eL19Family
EB [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
EB [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
EB [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
EB [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
FB [auth LS]IPR028877Large ribosomal subunit protein eL20Family
FB [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
FB [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
GB [auth LT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
GB [auth LT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
GB [auth LT]IPR001147Large ribosomal subunit protein eL21Family
GB [auth LT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HB [auth LU]IPR002671Large ribosomal subunit protein eL22Family
HB [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
IB [auth LV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IB [auth LV]IPR000218Large ribosomal subunit protein uL14Family
IB [auth LV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
JB [auth LW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
JB [auth LW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
JB [auth LW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
KB [auth LX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
KB [auth LX]IPR013025Large ribosomal subunit protein uL23-likeFamily
KB [auth LX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
KB [auth LX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
KB [auth LX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
MB [auth LZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
MB [auth LZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
MB [auth LZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MB [auth LZ]IPR001141Large ribosomal subunit protein eL27Family
MB [auth LZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
NB [auth La]IPR021131Large ribosomal subunit protein uL15/eL18Domain
NB [auth La]IPR030878Large ribosomal subunit protein uL15Family
NB [auth La]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
NB [auth La]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
OB [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
PB [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
PB [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
PB [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
PB [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
RB [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
RB [auth Le]IPR001515Large ribosomal subunit protein eL32Family
RB [auth Le]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
SB [auth Lf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
SB [auth Lf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
SB [auth Lf]IPR001780Large ribosomal subunit protein eL33Family
SB [auth Lf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
TB [auth Lg]IPR008195Large ribosomal subunit protein eL34Family
TB [auth Lg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
VB [auth Li]IPR000509Large ribosomal subunit protein eL36Family
VB [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
WB [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
WB [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
WB [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
WB [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XB [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
XB [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
YB [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
YB [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
YB [auth Ll]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
ZB [auth Lm]IPR019954Ubiquitin conserved siteConserved Site
ZB [auth Lm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
ZB [auth Lm]IPR000626Ubiquitin-like domainDomain
ZB [auth Lm]IPR019956Ubiquitin domainDomain
ZB [auth Lm]IPR050158Ubiquitin and ubiquitin-likeFamily
ZB [auth Lm]IPR001975Large ribosomal subunit protein eL40 domainDomain
ZB [auth Lm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
CC [auth Lo]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
CC [auth Lo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CC [auth Lo]IPR000552Large ribosomal subunit protein eL42Family
DC [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
DC [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DC [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DC [auth Lp]IPR050522Eukaryotic ribosomal protein eL43Family
EC [auth L1]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
EC [auth L1]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
EC [auth L1]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
EC [auth L1]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
EC [auth L1]IPR002143Large ribosomal subunit protein uL1Family
EC [auth L1]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
GC [auth CN]IPR012270CCR4-NOT complex, subunit 3/ 5Family
GC [auth CN]IPR007282NOT2/NOT3/NOT5, C-terminalDomain
GC [auth CN]IPR007207CCR4-Not complex component, Not N-terminal domainDomain
GC [auth CN]IPR038635CCR4-NOT complex subunit 2/3/5, C-terminal domain superfamilyHomologous Superfamily
GC [auth CN]IPR040168Not2/Not3/Not5Family
O [auth SI]IPR001047Small ribosomal subunit protein eS8Family
O [auth SI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
O [auth SI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
O [auth SI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
P [auth SJ]IPR002942RNA-binding S4 domainDomain
P [auth SJ]IPR022801Small ribosomal subunit protein uS4Family
P [auth SJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
P [auth SJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
P [auth SJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
P [auth SJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
Q [auth SK]IPR037447Small ribosomal subunit protein eS10Family
Q [auth SK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Q [auth SK]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
Q [auth SK]IPR005326Plectin/eS10, N-terminalDomain
CA [auth SW]IPR000630Small ribosomal subunit protein uS8Family
CA [auth SW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
CA [auth SW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
EA [auth SY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
EA [auth SY]IPR001976Small ribosomal subunit protein eS24Family
EA [auth SY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EA [auth SY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
FA [auth SZ]IPR004977Small ribosomal subunit protein eS25Family
FA [auth SZ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
IA [auth Sc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
IA [auth Sc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IA [auth Sc]IPR000289Small ribosomal subunit protein eS28Family
KA [auth Se]IPR006846Small ribosomal subunit protein eS30Family
MA [auth Sg]IPR019775WD40 repeat, conserved siteConserved Site
MA [auth Sg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
MA [auth Sg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
MA [auth Sg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
MA [auth Sg]IPR001680WD40 repeatRepeat
MA [auth Sg]IPR020472G-protein beta WD-40 repeatRepeat
NA [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
NA [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
NA [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
NA [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
NA [auth LA]IPR002171Large ribosomal subunit protein uL2Family
OA [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
OA [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
OA [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
OA [auth LB]IPR000597Large ribosomal subunit protein uL3Family
OA [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
UA [auth LH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
UA [auth LH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
UA [auth LH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
UA [auth LH]IPR000702Large ribosomal subunit protein uL6-likeFamily
VA [auth LI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
VA [auth LI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
VA [auth LI]IPR016180Large ribosomal subunit protein uL16 domainDomain
VA [auth LI]IPR047873Large ribosomal subunit protein uL16Family
VA [auth LI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
BB [auth LO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
BB [auth LO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
BB [auth LO]IPR005822Large ribosomal subunit protein uL13Family
BB [auth LO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
LB [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
LB [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
LB [auth LY]IPR005824KOWDomain
LB [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LB [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
LB [auth LY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
QB [auth Ld]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
QB [auth Ld]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
QB [auth Ld]IPR000054Large ribosomal subunit protein eL31Family
UB [auth Lh]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
UB [auth Lh]IPR001854Large ribosomal subunit protein uL29Family
UB [auth Lh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
UB [auth Lh]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AC [auth Ln],
BC [auth L2]
IPR007836Large ribosomal subunit protein eS32Family
H [auth SB]IPR001593Small ribosomal subunit protein eS1Family
H [auth SB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
H [auth SB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
FC [auth P0]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
FC [auth P0]IPR001790Large ribosomal subunit protein uL10Family
FC [auth P0]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
FC [auth P0]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
FC [auth P0]IPR050323Universal ribosomal protein uL10Family
FC [auth P0]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
I [auth SC]IPR000851Small ribosomal subunit protein uS5Family
I [auth SC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
I [auth SC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
I [auth SC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
I [auth SC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth SC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
I [auth SC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily