Skip to main content

 8K2F | pdb_00008k2f

Crystal structure of Group 1 oligosaccharide-releasing beta-N-acetylgalactosaminidase NgaCa from Cohnella abietis, apo 1 form

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22680Glycoside hydrolase 123 N-terminal domain (Glyco_hydro_123_N_2)Glycoside hydrolase 123 N-terminal domainThis entry represents the N-terminal domain of a group of glycoside hydrolases 123, from bacteria [1,2]. Domain
PF13320Glycoside hydrolase 123, catalytic domain (GH123_cat)Glycoside hydrolase 123, catalytic domainThis domain is found at the C terminus of protein members of the glycoside hydrolase family 123, including N-acetylgalactosaminidase from Clostridium perfringens. This enzyme removes specific terminal N-D-acetylgalactosamine from glycosphingolipids. ...This domain is found at the C terminus of protein members of the glycoside hydrolase family 123, including N-acetylgalactosaminidase from Clostridium perfringens. This enzyme removes specific terminal N-D-acetylgalactosamine from glycosphingolipids. This catalytic domain adopts an alpha/beta barrel configuration with a two-stranded beta sheet and a pair of alpha-helices at the C-terminal end [1,2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR025150Glycoside hydrolase 123, catalytic domainDomain
IPR053850Glycoside hydrolase 123, N-terminal domainDomain