8JRE
Cryo-EM structure of a designed AAV8-based vector
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
AA [auth 2] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
EB [auth w] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
KA [auth c] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
A [auth 1] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
AB [auth s] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
B [auth A] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
BA [auth 3] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
BB [auth t] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
C [auth B] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
CA [auth 4] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
CB [auth u] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
D [auth C] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
DA [auth 5] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
DB [auth v] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
E [auth D] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
EA [auth 6] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
F [auth E] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
FA [auth 7] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
FB [auth x] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
G [auth F] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
GA [auth 8] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
GB [auth y] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
H [auth G] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
HA [auth 9] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
HB [auth z] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
I [auth H] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
IA [auth a] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
J [auth I] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
JA [auth b] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
K [auth J] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
L [auth K] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
LA [auth d] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
M [auth L] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
MA [auth e] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
N [auth M] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
NA [auth f] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
O [auth N] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
OA [auth g] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
P [auth O] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
PA [auth h] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
Q [auth P] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
QA [auth i] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
R [auth Q] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
RA [auth j] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
S [auth R] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
SA [auth l] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
T [auth S] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
TA [auth k] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
U [auth T] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
UA [auth m] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
V | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
VA [auth n] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
W | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
WA [auth o] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
X | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
XA [auth p] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
Y | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
YA [auth q] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
Z | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
ZA [auth r] | SCOP2B Superfamily | ssDNA viruses | 8071440 | 3000931 | SCOP2B (2021-05-27) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00740 | Parvovirus coat protein VP2 (Parvo_coat) | Parvovirus coat protein VP2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Capsid protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013607 | Phospholipase A2-like domain | Domain | |
IPR016184 | Capsid/spike protein, ssDNA virus | Homologous Superfamily | |
IPR036952 | Parvovirus coat protein VP1/VP2 | Homologous Superfamily | |
IPR001403 | Parvovirus coat protein VP2 | Domain |