8J1R
cryo-EM structures of Ufd4 in complex with Ubc4-Ub
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth C] | SCOP2B Superfamily | UBC-like | 8034822 | 3000570 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00632 | HECT-domain (ubiquitin-transferase) (HECT) | HECT-domain (ubiquitin-transferase) | The name HECT comes from Homologous to the E6-AP Carboxyl Terminus. | Domain | |
B [auth C] | PF00179 | Ubiquitin-conjugating enzyme (UQ_con) | Ubiquitin-conjugating enzyme | Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR000569 | HECT domain | Domain | |
IPR035983 | HECT, E3 ligase catalytic domain | Homologous Superfamily | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR045322 | E3 ubiquitin-protein ligase HECTD1/TRIP12-like | Family | |
B [auth C] | IPR000608 | Ubiquitin-conjugating enzyme E2 | Domain |
B [auth C] | IPR016135 | Ubiquitin-conjugating enzyme/RWD-like | Homologous Superfamily |
B [auth C] | IPR023313 | Ubiquitin-conjugating enzyme, active site | Active Site |