8IZN
Structural study of Interferon-induced, double-stranded RNA-activated protein kinase (PKR) and Non-structural protein 1 (NS1) complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00035 | Double-stranded RNA binding motif (dsrm) | Double-stranded RNA binding motif | Sequences gathered for seed by HMM_iterative_training Putative motif shared by proteins that bind to dsRNA. At least some DSRM proteins seem to bind to specific RNA targets. Exemplified by Staufen, which is involved in localisation of at least five d ... | Domain | |
PF00600 | Influenza non-structural protein (NS1) (Flu_NS1) | Influenza non-structural protein (NS1) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000719 | Protein kinase domain | Domain | |
IPR044453 | EIF2AK2, second double-stranded RNA binding domain | Domain | |
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR050339 | Cell Cycle and Stress Response Kinase | Family | |
IPR044452 | EIF2AK2, first double-stranded RNA binding domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR014720 | Double-stranded RNA-binding domain | Domain | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site | |
IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily | |
IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily | |
IPR000256 | Influenza A virus NS1 protein | Family | |
IPR004208 | Influenza non-structural protein (NS1) | Family |