8IP9

Wheat 40S ribosome in complex with a tRNAi


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth oa]SCOP2B SuperfamilyS13-like H2TH domain8101709 3000053 SCOP2B (2021-05-27)
S [auth ua]SCOP2B SuperfamilyNucleic acid-binding proteins8100016 3000135 SCOP2B (2021-05-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
GA [auth IB]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
GA [auth IB]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth aa]18S ribosomal RNA---
B [auth ba]40S ribosomal protein eS24
E [auth ga]40S ribosomal protein S23
F [auth ha]RACK1
J [auth la]40S ribosomal protein uS9
L [auth na]40S ribosomal protein uS11
M [auth oa]40S ribosomal protein uS13
P [auth ra]40S ribosomal protein eS19
S [auth ua]40S ribosomal protein eS28
BA [auth eb]40S ribosomal protein uS4
DA [auth gb]40S ribosomal protein eS6
EA [auth hb]40S ribosomal protein eS7
FA [auth ib]40S ribosomal protein uS17
HA [auth al]mRNA---
K [auth ma]40S ribosomal protein uS10
N [auth pa]40S ribosomal protein uS15
O [auth qa]40S ribosomal protein eS17
Q [auth sa]40S ribosomal protein uS19
R [auth ta]40S ribosomal protein eS25 -
T [auth va]40S ribosomal protein uS8
U [auth wa]40S ribosomal protein uS14
V [auth xa]40S ribosomal protein eS27
W [auth ya]40S ribosomal protein eS30
X [auth za]40S ribosomal protein uS2
Y [auth bb]40S ribosomal protein eS1
Z [auth cb]40S ribosomal protein eS21
AA [auth db]40S ribosomal protein eS26
CA [auth fb]40S ribosomal protein uS5
C [auth ca]40S ribosomal protein eS8
GA [auth IB]60S ribosomal protein eL41
IA [auth cl]tRNAi---
D [auth da]40S ribosomal protein eS10 -
G [auth ia]40S ribosomal protein uS3
H [auth ja]40S ribosomal protein eS4
I [auth ka]40S ribosomal protein uS7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth ba]IPR001976Small ribosomal subunit protein eS24Family
B [auth ba]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
B [auth ba]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
E [auth ga]IPR006032Small ribosomal subunit protein uS12Family
E [auth ga]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth ga]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
F [auth ha]IPR019775WD40 repeat, conserved siteConserved Site
F [auth ha]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
F [auth ha]IPR045223Small ribosomal subunit protein RACK1-likeFamily
F [auth ha]IPR001680WD40 repeatRepeat
F [auth ha]IPR020472G-protein beta WD-40 repeatRepeat
F [auth ha]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
J [auth la]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
J [auth la]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
J [auth la]IPR000754Small ribosomal subunit protein uS9Family
J [auth la]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
L [auth na]IPR001971Small ribosomal subunit protein uS11Family
L [auth na]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
L [auth na]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth oa]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth oa]IPR001892Small ribosomal subunit protein uS13Family
M [auth oa]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth oa]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
P [auth ra]IPR001266Small ribosomal subunit protein eS19Family
P [auth ra]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
P [auth ra]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
P [auth ra]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
S [auth ua]IPR028626Ribosomal protein eS28 conserved siteConserved Site
S [auth ua]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
S [auth ua]IPR000289Small ribosomal subunit protein eS28Family
BA [auth eb]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
BA [auth eb]IPR002942RNA-binding S4 domainDomain
BA [auth eb]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
BA [auth eb]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
BA [auth eb]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
BA [auth eb]IPR022801Small ribosomal subunit protein uS4Family
DA [auth gb]IPR014401Small ribosomal subunit protein eS6-likeFamily
DA [auth gb]IPR001377Small ribosomal subunit protein eS6Family
DA [auth gb]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
EA [auth hb]IPR000554Small ribosomal subunit protein eS7Family
EA [auth hb]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
FA [auth ib]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
FA [auth ib]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FA [auth ib]IPR000266Small ribosomal subunit protein uS17Family
FA [auth ib]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
FA [auth ib]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
K [auth ma]IPR001848Small ribosomal subunit protein uS10Family
K [auth ma]IPR027486Small ribosomal subunit protein uS10 domainDomain
K [auth ma]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
K [auth ma]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
N [auth pa]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
N [auth pa]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
N [auth pa]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
N [auth pa]IPR000589Small ribosomal subunit protein uS15Family
O [auth qa]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
O [auth qa]IPR001210Small ribosomal subunit protein eS17Family
Q [auth sa]IPR002222Small ribosomal subunit protein uS19Family
Q [auth sa]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
Q [auth sa]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
Q [auth sa]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
R [auth ta]IPR004977Small ribosomal subunit protein eS25Family
R [auth ta]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
T [auth va]IPR000630Small ribosomal subunit protein uS8Family
T [auth va]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
T [auth va]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
U [auth wa]IPR001209Small ribosomal subunit protein uS14Family
U [auth wa]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
U [auth wa]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
V [auth xa]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
V [auth xa]IPR000592Small ribosomal subunit protein eS27Family
V [auth xa]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
W [auth ya]IPR006846Small ribosomal subunit protein eS30Family
X [auth za]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
X [auth za]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
X [auth za]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
X [auth za]IPR001865Small ribosomal subunit protein uS2Family
X [auth za]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
Y [auth bb]IPR001593Small ribosomal subunit protein eS1Family
Y [auth bb]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
Y [auth bb]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
Z [auth cb]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
Z [auth cb]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
Z [auth cb]IPR001931Small ribosomal subunit protein eS21Family
AA [auth db]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
AA [auth db]IPR000892Small ribosomal subunit protein eS26Family
AA [auth db]IPR047864Ribosomal protein eS26, conserved siteConserved Site
CA [auth fb]IPR000851Small ribosomal subunit protein uS5Family
CA [auth fb]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
CA [auth fb]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
CA [auth fb]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
CA [auth fb]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
CA [auth fb]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
CA [auth fb]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
C [auth ca]IPR001047Small ribosomal subunit protein eS8Family
C [auth ca]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
C [auth ca]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
GA [auth IB]IPR007836Large ribosomal subunit protein eS32Family
D [auth da]IPR037447Small ribosomal subunit protein eS10Family
D [auth da]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
D [auth da]IPR005326Plectin/eS10, N-terminalDomain
G [auth ia]IPR004044K Homology domain, type 2Domain
G [auth ia]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
G [auth ia]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
G [auth ia]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
G [auth ia]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
G [auth ia]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
G [auth ia]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
H [auth ja]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
H [auth ja]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
H [auth ja]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
H [auth ja]IPR002942RNA-binding S4 domainDomain
H [auth ja]IPR013845Small ribosomal subunit protein eS4, central regionDomain
H [auth ja]IPR000876Small ribosomal subunit protein eS4Family
H [auth ja]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth ja]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
H [auth ja]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
H [auth ja]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
H [auth ja]IPR005824KOWDomain
I [auth ka]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
I [auth ka]IPR000235Small ribosomal subunit protein uS7Family
I [auth ka]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
I [auth ka]IPR023798Small ribosomal subunit protein uS7 domainDomain
I [auth ka]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily