Annotations: 8IMK

D3-D4, D1-D2, D'3-D'4, D'1-D'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster C)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
AA [auth Z]	Ropporin_N	e8imkZ1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
BB [auth z]	Ropporin_N	e8imkz1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
N [auth M]	GspA_SrpA_N	e8imkM1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GspA_SrpA_N	ECOD (v295)
OA [auth m]	Ropporin_N	e8imkm1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
L [auth K]	Ropporin_N	e8imkK1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
LA [auth j]	Ropporin_N	e8imkj1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
MA [auth k]	Ropporin_N	e8imkk1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
NA [auth l]	Ropporin_N	e8imkl1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
M [auth L]	Ropporin_N	e8imkL1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
K [auth J]	Ropporin_N	e8imkJ1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
H [auth G]	GspA_SrpA_N	e8imkG1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GspA_SrpA_N	ECOD (v295)
I [auth H]	Ropporin_N	e8imkH1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
J [auth I]	Ropporin_N	e8imkI1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
U [auth T]	Ropporin_N	e8imkT1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
VA [auth t]	Ropporin_N	e8imkt1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
W [auth V]	Ropporin_N	e8imkV1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
X [auth W]	Ropporin_N	e8imkW1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
Y [auth X]	Ropporin_N	e8imkX1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
YA [auth w]	Ropporin_N	e8imkw1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
ZA [auth x]	Ropporin_N	e8imkx1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
Z [auth Y]	Ropporin_N	e8imkY1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
XA [auth v]	Ropporin_N	e8imkv1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
WA [auth u]	Ropporin_N	e8imku1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
V [auth U]	Ropporin_N	e8imkU1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
KA [auth i]	Ropporin_N	e8imki1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
JA [auth h]	Ropporin_N	e8imkh1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
IA [auth g]	Ropporin_N	e8imkg1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
AB [auth y]	Ropporin_N	e8imky1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
FA [auth d]	Ropporin_N	e8imkd1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
HA [auth f]	Ropporin_N	e8imkf1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
G [auth F]	Ropporin_N	e8imkF1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
E [auth D]	Ropporin_N	e8imkD1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
DA [auth b]	Ropporin_N	e8imkb1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
C [auth B]	Ropporin_N	e8imkB1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
EA [auth c]	Ropporin_N	e8imkc1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
GA [auth e]	Ropporin_N	e8imke1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
O [auth N]	Ropporin_N	e8imkN1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
P [auth O]	Ropporin_N	e8imkO1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
Q [auth P]	Ropporin_N	e8imkP1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
QA [auth o]	Ropporin_N	e8imko1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
R [auth Q]	Ropporin_N	e8imkQ1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
S [auth R]	Ropporin_N	e8imkR1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
SA [auth q]	Ropporin_N	e8imkq1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
UA [auth s]	Ropporin_N	e8imks1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
TA [auth r]	Ropporin_N	e8imkr1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
T [auth S]	Ropporin_N	e8imkS1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
RA [auth p]	Ropporin_N	e8imkp1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
PA [auth n]	Ropporin_N	e8imkn1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
F [auth E]	Ropporin_N	e8imkE1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
D [auth C]	Ropporin_N	e8imkC1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
CA [auth a]	Ropporin_N	e8imka1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Ropporin_N	ECOD (v295)
B [auth A]	GspA_SrpA_N	e8imkA1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GspA_SrpA_N	ECOD (v295)
BA [auth 2]	V-set	e8imk21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth Z], BB [auth z], N [auth M], OA [auth m]	ApcC1	-	-	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], NA [auth l]	ApcB2	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], JA [auth h], KA [auth i], U [auth T], V [auth U], VA [auth t], W [auth V], WA [auth u], X [auth W], XA [auth v], Y [auth X], YA [auth w], Z [auth Y], ZA [auth x]	ApcB1	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], HA [auth f]	ApcA2	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], GA [auth e], O [auth N], P [auth O], PA [auth n], Q [auth P], QA [auth o], R [auth Q], RA [auth p], S [auth R], SA [auth q], T [auth S], TA [auth r], UA [auth s]	ApcA1	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
A [auth 1], BA [auth 2]	ApcH	-	photosynthesis metabolic process cellular process	cellular anatomical structure endomembrane system protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle organelle membraneless organelle photosynthetic membrane phycobilisome cellular anatomical structure endomembrane system protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth Z], BB [auth z], N [auth M], OA [auth m]	IPR008213	CpcD-like domain	Domain
K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], NA [auth l]	IPR006245	Allophycocyanin, beta subunit	Family
K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], NA [auth l]	IPR012128	Phycobilisome, alpha/beta subunit	Family
AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], JA [auth h], KA [auth i], U [auth T], V [auth U], VA [auth t], W [auth V], WA [auth u], X [auth W], XA [auth v], Y [auth X], YA [auth w], Z [auth Y], ZA [auth x]	IPR012128	Phycobilisome, alpha/beta subunit	Family
C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], HA [auth f]	IPR012128	Phycobilisome, alpha/beta subunit	Family
B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], GA [auth e], O [auth N], P [auth O], PA [auth n], Q [auth P], QA [auth o], R [auth Q], RA [auth p], S [auth R], SA [auth q], T [auth S], TA [auth r], UA [auth s]	IPR012128	Phycobilisome, alpha/beta subunit	Family
A [auth 1], BA [auth 2]	IPR001297	Phycobilisome linker domain	Domain
A [auth 1], BA [auth 2]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8IMK | pdb_00008imk

D3-D4, D1-D2, D'3-D'4, D'1-D'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster C)

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage