8IMK | pdb_00008imk

D3-D4, D1-D2, D'3-D'4, D'1-D'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster C)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
OA [auth m]	Cullin_AB	e8imkm1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
N [auth M]	GspA_SrpA_N	e8imkM1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GspA_SrpA_N	ECOD (v294.1)
BB [auth z]	Cullin_AB	e8imkz1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
AA [auth Z]	Cullin_AB	e8imkZ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
NA [auth l]	Cullin_AB	e8imkl1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
MA [auth k]	Cullin_AB	e8imkk1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
M [auth L]	Cullin_AB	e8imkL1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
LA [auth j]	Cullin_AB	e8imkj1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
L [auth K]	Cullin_AB	e8imkK1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
K [auth J]	Cullin_AB	e8imkJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
ZA [auth x]	Cullin_AB	e8imkx1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
Z [auth Y]	Cullin_AB	e8imkY1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
YA [auth w]	Cullin_AB	e8imkw1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
Y [auth X]	Cullin_AB	e8imkX1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
XA [auth v]	Cullin_AB	e8imkv1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
X [auth W]	Cullin_AB	e8imkW1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
WA [auth u]	Cullin_AB	e8imku1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
W [auth V]	Cullin_AB	e8imkV1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
VA [auth t]	Cullin_AB	e8imkt1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
V [auth U]	Cullin_AB	e8imkU1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
U [auth T]	Cullin_AB	e8imkT1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
KA [auth i]	Cullin_AB	e8imki1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
JA [auth h]	Cullin_AB	e8imkh1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
J [auth I]	Cullin_AB	e8imkI1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
IA [auth g]	Cullin_AB	e8imkg1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
I [auth H]	Cullin_AB	e8imkH1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
H [auth G]	GspA_SrpA_N	e8imkG1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GspA_SrpA_N	ECOD (v294.1)
AB [auth y]	Cullin_AB	e8imky1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
HA [auth f]	Cullin_AB	e8imkf1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
G [auth F]	Cullin_AB	e8imkF1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
FA [auth d]	Cullin_AB	e8imkd1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
E [auth D]	Cullin_AB	e8imkD1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
DA [auth b]	Cullin_AB	e8imkb1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
C [auth B]	Cullin_AB	e8imkB1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
UA [auth s]	Cullin_AB	e8imks1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
TA [auth r]	Cullin_AB	e8imkr1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
T [auth S]	Cullin_AB	e8imkS1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
SA [auth q]	Cullin_AB	e8imkq1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
S [auth R]	Cullin_AB	e8imkR1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
RA [auth p]	Cullin_AB	e8imkp1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
R [auth Q]	Cullin_AB	e8imkQ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
QA [auth o]	Cullin_AB	e8imko1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
Q [auth P]	Cullin_AB	e8imkP1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
PA [auth n]	Cullin_AB	e8imkn1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
P [auth O]	Cullin_AB	e8imkO1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
O [auth N]	Cullin_AB	e8imkN1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
GA [auth e]	Cullin_AB	e8imke1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
F [auth E]	Cullin_AB	e8imkE1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
EA [auth c]	Cullin_AB	e8imkc1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
D [auth C]	Cullin_AB	e8imkC1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
CA [auth a]	Cullin_AB	e8imka1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
B [auth A]	GspA_SrpA_N	e8imkA1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: GspA_SrpA_N	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth Z], BB [auth z], N [auth M], OA [auth m]	ApcC1	-	-	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], NA [auth l]	ApcB2	-	photosynthesis metabolic process cellular process	protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid
AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], JA [auth h], KA [auth i], U [auth T], V [auth U], VA [auth t], W [auth V], WA [auth u], X [auth W], XA [auth v], Y [auth X], YA [auth w], Z [auth Y], ZA [auth x]	ApcB1	-	photosynthesis metabolic process cellular process	protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid
C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], HA [auth f]	ApcA2	-	photosynthesis metabolic process cellular process	protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid
B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], GA [auth e], O [auth N], P [auth O], PA [auth n], Q [auth P], QA [auth o], R [auth Q], RA [auth p], S [auth R], SA [auth q], T [auth S], TA [auth r], UA [auth s]	ApcA1	-	photosynthesis metabolic process cellular process	protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid
A [auth 1], BA [auth 2]	ApcH	-	photosynthesis metabolic process cellular process	cellular anatomical structure endomembrane system protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle organelle membraneless organelle photosynthetic membrane phycobilisome cellular anatomical structure endomembrane system protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth Z], BB [auth z], N [auth M], OA [auth m]	IPR008213	CpcD-like domain	Domain
K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], NA [auth l]	IPR006245	Allophycocyanin, beta subunit	Family
K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], K [auth J], L [auth K], LA [auth j], M [auth L], MA [auth k], NA [auth l]	IPR012128	Phycobilisome, alpha/beta subunit	Family
AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], AB [auth y], H [auth G], I [auth H], IA [auth g], J [auth I], JA [auth h], KA [auth i], U [auth T], V [auth U], VA [auth t], W [auth V], WA [auth u], X [auth W], XA [auth v], Y [auth X], YA [auth w], Z [auth Y], ZA [auth x]	IPR012128	Phycobilisome, alpha/beta subunit	Family
C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], C [auth B], DA [auth b], E [auth D], FA [auth d], G [auth F], HA [auth f]	IPR012128	Phycobilisome, alpha/beta subunit	Family
B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], B [auth A], CA [auth a], D [auth C], EA [auth c], F [auth E], GA [auth e], O [auth N], P [auth O], PA [auth n], Q [auth P], QA [auth o], R [auth Q], RA [auth p], S [auth R], SA [auth q], T [auth S], TA [auth r], UA [auth s]	IPR012128	Phycobilisome, alpha/beta subunit	Family
A [auth 1], BA [auth 2]	IPR001297	Phycobilisome linker domain	Domain
A [auth 1], BA [auth 2]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily