8IIB
Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta85 mutant (residues 86-546)
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e8iibA2 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00680 | e8iibA1 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00680 | ECOD (1.6) |
B | F_UNCLASSIFIED | e8iibB1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00680 | e8iibB2 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00680 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024387 | Peptidase C3G, Picornavirus | Domain | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR004004 | Helicase/polymerase/peptidase polyprotein, Calicivirus-type | Family | |
IPR001205 | RNA-directed RNA polymerase, C-terminal domain | Domain | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily | |
IPR044067 | Picornavirales 3C/3C-like protease domain | Domain | |
IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily | |
IPR014759 | Helicase, superfamily 3, single-stranded RNA virus | Domain | |
IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
IPR007094 | RNA-directed RNA polymerase, catalytic domain | Domain | |
IPR000605 | Helicase, superfamily 3, single-stranded DNA/RNA virus | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |