8IFM
Cryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth F], E [auth J], G [auth N] | PF13676 | TIR domain (TIR_2) | TIR domain | This is a family of Toll-like receptors. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth F], E [auth J], G [auth N] | TIR domain-containing protein | - | - | |
B, D [auth G], F [auth K], H [auth O] | Piwi domain-containing protein | - | - | |
I [auth C], K [auth H], M [auth L], O [auth P] | guide RNA | - | - | - |
J [auth D], L [auth I], N [auth M], P [auth Q] | target ssDNA | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth F], E [auth J], G [auth N] | IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | Domain |
A, C [auth F], E [auth J], G [auth N] | IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily | Homologous Superfamily |
B, D [auth G], F [auth K], H [auth O] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
B, D [auth G], F [auth K], H [auth O] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |