8IE3

human nuclear pre-60S ribosomal particle - State E


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth 6]SCOP2B SuperfamilyPentein 8098764 3000640 SCOP2B (2022-06-29)
E [auth 9]SCOP2B Superfamilybeta-beta-alpha zinc fingers 8036154 3001077 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyTranslational proteins 8078351 3000811 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyRibosomal protein L29e 8053036 3002157 SCOP2B (2022-06-29)
H [auth D]SCOP2B SuperfamilyRibosomal protein L4 8052832 3001146 SCOP2B (2022-06-29)
H [auth D]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052831 3002143 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyL30e-like 8077491 3001739 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilyRibosomal protein L34e-like 8053540 3002203 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyRibosomal protein L6 8033688 3000724 SCOP2B (2022-06-29)
N [auth K]SCOP2B SuperfamilyRibosomal protein L36e 8053120 3002161 SCOP2B (2022-06-29)
O [auth L]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8077123 3001045 SCOP2B (2022-06-29)
Q [auth O]SCOP2B SuperfamilyRibosomal L38e protein-like 8053567 3002206 SCOP2B (2022-06-29)
R [auth P]SCOP2B SuperfamilyRibosomal protein L39e 8095603 3001756 SCOP2B (2022-06-29)
S [auth Q]SCOP2B SuperfamilyRibosomal protein L13e-like 8053155 3002162 SCOP2B (2022-06-29)
USCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8098812 3000210 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101551 3001320 SCOP2B (2022-06-29)
X [auth Z]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095977 3001045 SCOP2B (2022-06-29)
BA [auth e]SCOP2B Superfamily50S Ribosomal protein L14-like 8072050 3000433 SCOP2B (2022-06-29)
CA [auth g]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095967 3000210 SCOP2B (2022-06-29)
DA [auth h]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076756 3000334 SCOP2B (2022-06-29)
EA [auth i]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053050 3000334 SCOP2B (2022-06-29)
HA [auth n]SCOP2B SuperfamilyTranslational proteins 8087455 3000811 SCOP2B (2022-06-29)
IA [auth o]SCOP2B SuperfamilyRibosomal protein L6e, N-terminal domain 8053099 3002160 SCOP2B (2022-06-29)
IA [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053100 3000334 SCOP2B (2022-06-29)
JA [auth p]SCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052922 3002152 SCOP2B (2022-06-29)
JA [auth p]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8052923 3001378 SCOP2B (2022-06-29)
PA [auth r]SCOP2B SuperfamilyTranslational machinery components 8052887 3000571 SCOP2B (2022-06-29)
QA [auth d]SCOP2B Superfamily60S Ribosomal protein L22e 8053060 3002158 SCOP2B (2022-06-29)
TA [auth Y]SCOP2B SuperfamilyRibosomal protein L22 8076704 3001078 SCOP2B (2022-06-29)
VA [auth T]SCOP2B SuperfamilyRL5-like 8073892 3001709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth 6]PF01912e8ie361 A: a+b duplicates or obligate multimersX: Pentein (From Topology)H: Pentein (From Topology)T: PenteinF: PF01912ECOD (1.6)
F [auth B]PF00297e8ie3B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
G [auth C]PF01779e8ie3C1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
H [auth D]PF00573e8ie3D2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
H [auth D]PF14374e8ie3D1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
I [auth E]PF01248e8ie3E1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
J [auth F]PF01199e8ie3F1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
K [auth G]PF01248e8ie3G1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
L [auth H]PF00831e8ie3H1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
M [auth I]PF00347e8ie3I1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
N [auth K]PF01158e8ie3K1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
O [auth L]PF00828e8ie3L1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
P [auth M]PF01907e8ie3M1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
Q [auth O]PF01781e8ie3O1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
R [auth P]PF00832e8ie3P1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
S [auth Q]PF01294e8ie3Q1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
T [auth S]PF00467,PF01929e8ie3S1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
UPF00827e8ie3U1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
VPF00572e8ie3V1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
W [auth X]PF01780e8ie3X1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
X [auth Z]PF17135e8ie3Z1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
Y [auth a]PF01280e8ie3a1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
Y [auth a]PF01280e8ie3a2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
Z [auth b]F_UNCLASSIFIEDe8ie3b2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
Z [auth b]PF01775e8ie3b1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
AA [auth c]PF01157e8ie3c1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
BA [auth e]PF00238e8ie3e1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
CA [auth g]PF00276,PF03939e8ie3g1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
DA [auth h]PF16906e8ie3h1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
EA [auth i]PF00467,PF01777e8ie3i1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
FA [auth l]PF01778e8ie3l1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
GA [auth m]PF00181e8ie3m1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
GA [auth m]PF03947e8ie3m2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
HA [auth n]PF01247e8ie3n1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
IA [auth o]PF01159,PF03868e8ie3o1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
JA [auth p]PF00327,PF08079e8ie3p1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
PA [auth r]PF14204,PF17144e8ie3r1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
QA [auth d]PF01776e8ie3d1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
RA [auth j]PF01198e8ie3j1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
SA [auth k]PF01655e8ie3k1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
TA [auth Y]PF00237e8ie3Y1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
UA [auth J]PF00466e8ie3J1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
UA [auth J]PF17777e8ie3J2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
VA [auth T]PF00281,PF00673e8ie3T1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth 6]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
C [auth 7]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
E [auth 9]PF12171Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz)Zinc-finger double-stranded RNA-binding- Family
F [auth B]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
H [auth D]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
H [auth D]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
I [auth E]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
I [auth E]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth G]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
K [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
L [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
L [auth H]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
L [auth H]PF00467KOW motif (KOW)KOW motif- Family
M [auth I]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
M [auth I]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
M [auth I]PF00467KOW motif (KOW)KOW motif- Family
N [auth K]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
N [auth K]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
O [auth L]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
O [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
P [auth M]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
P [auth M]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
P [auth M]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
Q [auth O]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
R [auth P]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
S [auth Q]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
T [auth S]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
W [auth X]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
X [auth Z]PF10169LLP homolog (LLPH)LLP homolog- Family
X [auth Z]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
LA [auth A]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
LA [auth A]PF0192650S ribosome-binding GTPase (MMR_HSR1)50S ribosome-binding GTPase- Family
MA [auth 4]PF08155NOGCT (NUC087) domain (NOGCT)NOGCT (NUC087) domainThis C terminal domain is found in the NOG subfamily of nucleolar GTP-binding proteins [1].Domain
MA [auth 4]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins.Domain
MA [auth 4]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
NA [auth R]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
NA [auth R]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
NA [auth R]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
TA [auth Y]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
UA [auth J]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
UA [auth J]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
UA [auth J]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
VA [auth T]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 5]5S rRNA---
B [auth 6]Eukaryotic translation initiation factor 6
C [auth 7]Probable ribosome biogenesis protein RLP24
D [auth 8]5.8S rRNA---
E [auth 9]Zinc finger protein 593
F [auth B]60S ribosomal protein L3
G [auth C]60S ribosomal protein L29
H [auth D]60S ribosomal protein L4
I [auth E]60S ribosomal protein L30
J [auth F]60S ribosomal protein L34
K [auth G]60S ribosomal protein L7a
L [auth H]60S ribosomal protein L35
M [auth I]60S ribosomal protein L9
N [auth K]60S ribosomal protein L36
O [auth L]60S ribosomal protein L27a
P [auth M]60S ribosomal protein L37
Q [auth O]60S ribosomal protein L38
R [auth P]60S ribosomal protein L39
S [auth Q]60S ribosomal protein L13
T [auth S]60S ribosomal protein L14
60S ribosomal protein L15
60S ribosomal protein L13a
W [auth X]60S ribosomal protein L37a
X [auth Z]60S ribosomal protein L18
Y [auth a]60S ribosomal protein L19
Z [auth b]60S ribosomal protein L18a
AA [auth c]60S ribosomal protein L21
BA [auth e]60S ribosomal protein L23
CA [auth g]60S ribosomal protein L23a
DA [auth h]60S ribosomal protein L26
EA [auth i]60S ribosomal protein L27
FA [auth l]60S ribosomal protein L28
GA [auth m]60S ribosomal protein L8
HA [auth n]60S ribosomal protein L35a
IA [auth o]60S ribosomal protein L6
JA [auth p]60S ribosomal protein L7
KA [auth z]Protein LLP homolog
LA [auth A]G Protein Nucleolar 2
MA [auth 4]GTP-binding protein 4
NA [auth R]Ribosome biogenesis protein NSA2 homolog
OA [auth 2]28S rRNA---
PA [auth r]60S ribosomal protein L5
QA [auth d]60S ribosomal protein L22
RA [auth j]60S ribosomal protein L31
SA [auth k]60S ribosomal protein L32
TA [auth Y]60S ribosomal protein L17
UA [auth J]mRNA turnover protein 4 homolog
VA [auth T]60S ribosomal protein L11

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth 6]IPR002769Translation initiation factor IF6Family
C [auth 7]IPR023438Large ribosomal subunit protein eL24Family
C [auth 7]IPR011017TRASH domainDomain
C [auth 7]IPR000988Large ribosomal subunit protein eL24-relatedFamily
C [auth 7]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
C [auth 7]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
E [auth 9]IPR003604Matrin/U1-C-like, C2H2-type zinc fingerDomain
E [auth 9]IPR051879C2H2-type Zinc Finger Maturation ProteinFamily
E [auth 9]IPR013087Zinc finger C2H2-typeDomain
E [auth 9]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
E [auth 9]IPR022755Zinc finger, double-stranded RNA bindingDomain
F [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
F [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth B]IPR000597Large ribosomal subunit protein uL3Family
F [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth C]IPR002673Large ribosomal subunit protein eL29Family
H [auth D]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
H [auth D]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
H [auth D]IPR002136Large ribosomal subunit protein uL4Family
H [auth D]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
H [auth D]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
I [auth E]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
I [auth E]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
I [auth E]IPR000231Large ribosomal subunit protein eL30Family
I [auth E]IPR039109Large ribosomal subunit protein eL30-likeFamily
I [auth E]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth F]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
J [auth F]IPR008195Large ribosomal subunit protein eL34Family
K [auth G]IPR001921Large ribosomal subunit protein eL8Family
K [auth G]IPR050257Eukaryotic ribosomal RNA-processing and assembly proteinFamily
K [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
K [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
K [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
K [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
L [auth H]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
L [auth H]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
L [auth H]IPR001854Large ribosomal subunit protein uL29Family
L [auth H]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
M [auth I]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
M [auth I]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
M [auth I]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
M [auth I]IPR000702Large ribosomal subunit protein uL6-likeFamily
N [auth K]IPR000509Large ribosomal subunit protein eL36Family
N [auth K]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
O [auth L]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
O [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
O [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
O [auth L]IPR030878Large ribosomal subunit protein uL15Family
O [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
P [auth M]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
P [auth M]IPR001569Large ribosomal subunit protein eL37Family
P [auth M]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
P [auth M]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Q [auth O]IPR002675Large ribosomal subunit protein eL38Family
Q [auth O]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
R [auth P]IPR000077Large ribosomal subunit protein eL39Family
R [auth P]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
R [auth P]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
S [auth Q]IPR001380Large ribosomal subunit protein eL13Family
S [auth Q]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
T [auth S]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth S]IPR039660Large ribosomal subunit protein eL14Family
T [auth S]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
T [auth S]IPR002784Large ribosomal subunit protein eL14 domainDomain
IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
IPR000439Large ribosomal subunit protein eL15Family
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
IPR005822Large ribosomal subunit protein uL13Family
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
W [auth X]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
W [auth X]IPR002674Large ribosomal subunit protein eL43Family
W [auth X]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
X [auth Z]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
X [auth Z]IPR000039Large ribosomal subunit protein eL18Family
X [auth Z]IPR021131Large ribosomal subunit protein uL15/eL18Domain
X [auth Z]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Y [auth a]IPR039547Large ribosomal subunit protein eL19Family
Y [auth a]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Y [auth a]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
Y [auth a]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Y [auth a]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Y [auth a]IPR000196Large ribosomal subunit protein eL19 domainDomain
Z [auth b]IPR028877Large ribosomal subunit protein eL20Family
Z [auth b]IPR023573Large ribosomal subunit protein eL20 domainDomain
Z [auth b]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
AA [auth c]IPR001147Large ribosomal subunit protein eL21Family
AA [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth c]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
AA [auth c]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
BA [auth e]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
BA [auth e]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
BA [auth e]IPR000218Large ribosomal subunit protein uL14Family
CA [auth g]IPR019985Large ribosomal subunit protein uL23Family
CA [auth g]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
CA [auth g]IPR013025Large ribosomal subunit protein uL23-likeFamily
CA [auth g]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth g]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
CA [auth g]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
DA [auth h]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DA [auth h]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
DA [auth h]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
DA [auth h]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth h]IPR005824KOWDomain
DA [auth h]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EA [auth i]IPR001141Large ribosomal subunit protein eL27Family
EA [auth i]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
EA [auth i]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
EA [auth i]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
EA [auth i]IPR005824KOWDomain
EA [auth i]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
FA [auth l]IPR029004Ribosomal eL28/Mak16Domain
FA [auth l]IPR002672Large ribosomal subunit protein eL28Family
GA [auth m]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
GA [auth m]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
GA [auth m]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GA [auth m]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
GA [auth m]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
GA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GA [auth m]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
GA [auth m]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
GA [auth m]IPR002171Large ribosomal subunit protein uL2Family
HA [auth n]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth n]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
HA [auth n]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth n]IPR001780Large ribosomal subunit protein eL33Family
IA [auth o]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
IA [auth o]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IA [auth o]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IA [auth o]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IA [auth o]IPR000915Large ribosomal subunit protein eL6Family
JA [auth p]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
JA [auth p]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
JA [auth p]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
JA [auth p]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
JA [auth p]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
JA [auth p]IPR039699Large ribosomal subunit protein uL30Family
JA [auth p]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
KA [auth z]IPR018784LLP homolog-likeFamily
LA [auth A]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
LA [auth A]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
LA [auth A]IPR024929Nucleolar GTP-binding protein 2, circularly permuted GTPase motifDomain
LA [auth A]IPR006073GTP binding domainDomain
LA [auth A]IPR012971Nucleolar GTP-binding protein 2, N-terminal domainDomain
LA [auth A]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
LA [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
MA [auth 4]IPR024926Nucleolar GTP-binding protein 1Family
MA [auth 4]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
MA [auth 4]IPR005225Small GTP-binding domainDomain
MA [auth 4]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
MA [auth 4]IPR012973NOG, C-terminalDomain
MA [auth 4]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
MA [auth 4]IPR041623NOG1, N-terminal helical domainDomain
MA [auth 4]IPR006073GTP binding domainDomain
NA [auth R]IPR039411Ribosomal biogenesis NSA2 familyFamily
NA [auth R]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
PA [auth r]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
PA [auth r]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
QA [auth d]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
QA [auth d]IPR002671Large ribosomal subunit protein eL22Family
RA [auth j]IPR000054Large ribosomal subunit protein eL31Family
RA [auth j]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
RA [auth j]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
SA [auth k]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
SA [auth k]IPR001515Large ribosomal subunit protein eL32Family
SA [auth k]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
TA [auth Y]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
TA [auth Y]IPR001063Large ribosomal subunit protein uL22Family
TA [auth Y]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
TA [auth Y]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
UA [auth J]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
UA [auth J]IPR001790Large ribosomal subunit protein uL10Family
UA [auth J]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
UA [auth J]IPR051742Ribosomal Assembly Factor uL10Family
UA [auth J]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
UA [auth J]IPR033867Ribosome assembly factor Mrt4Family
VA [auth T]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
VA [auth T]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
VA [auth T]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
VA [auth T]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
VA [auth T]IPR002132Large ribosomal subunit protein uL5Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth 6]PharosP56537
C [auth 7]PharosQ9UHA3
E [auth 9]PharosO00488
F [auth B]PharosP39023
H [auth D]PharosP36578
I [auth E]PharosP62888
J [auth F]PharosP49207
K [auth G]PharosP62424
L [auth H]PharosP42766
M [auth I]PharosP32969
N [auth K]PharosQ9Y3U8
O [auth L]PharosP46776
P [auth M]PharosP61927
Q [auth O]PharosP63173
S [auth Q]PharosP26373
T [auth S]PharosP50914
PharosP61313
PharosP40429
W [auth X]PharosP61513
X [auth Z]PharosQ07020
Y [auth a]PharosP84098
AA [auth c]PharosP46778
BA [auth e]PharosP62829
CA [auth g]PharosP62750
DA [auth h]PharosP61254
EA [auth i]PharosP61353
FA [auth l]PharosP46779
HA [auth n]PharosP18077
IA [auth o]PharosQ02878
JA [auth p]PharosP18124
KA [auth z]PharosQ9BRT6
LA [auth A]PharosQ13823
MA [auth 4]PharosQ9BZE4
NA [auth R]PharosO95478
PA [auth r]PharosP46777
QA [auth d]PharosP35268
RA [auth j]PharosP62899
SA [auth k]PharosP62910
TA [auth Y]PharosP18621
UA [auth J]PharosQ9UKD2
VA [auth T]PharosP62913