8HPJ
Crystal structure of the bacterial oxalate transporter OxlT in a ligand-free outward-facing form
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MFS_1 | e8hpjA1 | A: alpha complex topology | X: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | H: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | T: Major facilitator superfamily (MFS) general substrate transporter | F: MFS_1 | ECOD (1.6) |
D | MFS_1 | e8hpjD2 | A: alpha complex topology | X: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | H: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | T: Major facilitator superfamily (MFS) general substrate transporter | F: MFS_1 | ECOD (1.6) |
B | V-set_12 | e8hpjB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
E | V-set_12 | e8hpjE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
C | V-set | e8hpjC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
F | V-set | e8hpjF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV5 | - | oxalate | SAbDab (2024-08-16) | |
Light Chain | IGKV6 | Kappa | oxalate | SAbDab (2024-08-16) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07690 | Major Facilitator Superfamily (MFS_1) | Major Facilitator Superfamily | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Oxalate:formate antiporter |
| |||
Fv fragment Heavy chain | - | - | - | |
Fv fragment Light chain | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR026355 | Oxalate/formate antiporter | Family | |
IPR004741 | Oxalate/formate antiporter family transporter | Family | |
IPR011701 | Major facilitator superfamily | Family | |
IPR050327 | Proton-linked Monocarboxylate Transporter | Family | |
IPR036259 | MFS transporter superfamily | Homologous Superfamily | |
IPR020846 | Major facilitator superfamily domain | Domain |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Major Facilitator Superfamily (MFS) | Oxalate-formate antiporter |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |