Warning
You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.
Contact us
Toggle navigation
RCSB PDB
Deposit
Prepare Data
PDBx/mmCIF file
pdb_extract
SF-Tool
Ligand Expo
MAXIT
Validate Data
Validation Server
Validation API
Information for Journals
Validation Task Forces
Deposit Data
wwPDB OneDep System
PDB-Dev
Help and Resources
Deposit FAQ
Validation FAQ
Tutorials
Annotation Policies
Processing Procedures
PDBx/mmCIF Dictionary
PDBx/mmCIF User Guide
Chemical Component Dictionary
Biologically Interesting Molecule Reference Dictionary (BIRD)
BioSync/Beamlines/Facilities
Related Tools
Search
Advanced Search
Sequence Similarity Search
Structure Similarity Search
Chemical Similarity Search
Chemical Sketch Tool
Browse by Annotations
New Entries
Unreleased Entries
PDB Statistics
Visualize
Mol* (MolStar)
Sequence Annotations Viewer
Genome View
Analyze
Pairwise Structure Alignment
Symmetry Resources in the PDB
Structure Quality
Grouping Structures
PDB Citation MeSH Network Explorer
PDB Statistics
EPPIC Biological Assemblies
External Data and Resources
Integrated Resources
Additional Resources
Download
Coordinates and Experimental Data
Sequences
Ligands
File Download Services
Web Services
Learn
Training Courses
Guide to PDB Data
Molecule of the Month
Educational Resources
Curricula
Browse
News
SciArt Galleries
Irving Geis
David Goodsell
About
Contact Us
About RCSB PDB
Vision and Mission
Citation, Usage, Privacy Policies, Logo
News
PDB History
PDB50
User Community
Publications
RCSB PDB Advisory Committee
Team Members
Diversity, Equity, Inclusion, and Access
Service Status
Documentation
General Help
3D Structures in the Protein Data Bank
Computed Structure Models (CSM)
Search and Browse
Basic Search
Advanced Search
Browse Annotations
Visualize and Analyze
Sequence Viewers
Pairwise Structure Alignment
Exploring a 3D Structure
Grouping Structures
Programmatic Access
Additional Resources
Software Supporters
Deposition Resources
FAQs
Glossary
Careers
COVID-19
225,946
Structures from the PDB
1,068,577
Computed Structure Models (CSM)
Navigation Tabs
Structure Summary
Structure
Annotations
Experiment
Sequence
Genome
Ligands
Versions
Display Files
FASTA Sequence
mmCIF Format
mmCIF Format (Header)
PDB Format
PDB Format (Header)
Download Files
FASTA Sequence
PDBx/mmCIF Format
PDBx/mmCIF Format (gz)
BinaryCIF Format (gz)
PDB Format
PDB Format (gz)
PDBML/XML Format (gz)
Structure Factors (CIF)
Structure Factors (CIF - gz)
Validation Full PDF
Validation (XML - gz)
Validation (CIF - gz)
Validation 2fo-fc coefficients (CIF - gz)
Validation fo-fc coefficients (CIF - gz)
Biological Assembly 1 (CIF - gz)
Biological Assembly 2 (CIF - gz)
Biological Assembly 3 (CIF - gz)
Biological Assembly 4 (CIF - gz)
Biological Assembly 1 (PDB - gz)
Biological Assembly 2 (PDB - gz)
Biological Assembly 3 (PDB - gz)
Biological Assembly 4 (PDB - gz)
Map Coefficients (MTZ format)
Data API
8HB2
Crystal structure of Caenorhabditis elegans NMAD-1 in complex with ligand II
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
,
B
,
C
,
D
DNA N6-methyl adenine demethylase
oxidoreductase activity
catalytic activity
demethylase activity
DNA demethylase activity
broad specificity oxidative DNA demethylase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
catalytic activity, acting on DNA
catalytic activity, acting on a nucleic acid
2-oxoglutarate-dependent dioxygenase activity
dioxygenase activity
DNA N6-methyladenine demethylase activity
cation binding
ion binding
binding
oxidoreductase activity
catalytic activity
demethylase activity
DNA demethylase activity
broad specificity oxidative DNA demethylase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
catalytic activity, acting on DNA
catalytic activity, acting on a nucleic acid
2-oxoglutarate-dependent dioxygenase activity
dioxygenase activity
DNA N6-methyladenine demethylase activity
cation binding
ion binding
binding
metal ion binding
small molecule binding
Less
cellular response to stimulus
regulation of cellular process
response to stimulus
regulation of double-strand break repair
positive regulation of biological process
regulation of cellular response to stress
regulation of primary metabolic process
positive regulation of response to stimulus
nucleobase-containing compound metabolic process
positive regulation of metabolic process
positive regulation of DNA repair
cellular response to stress
response to stress
regulation of response to stress
cellular response to stimulus
regulation of cellular process
response to stimulus
regulation of double-strand break repair
positive regulation of biological process
regulation of cellular response to stress
regulation of primary metabolic process
positive regulation of response to stimulus
nucleobase-containing compound metabolic process
positive regulation of metabolic process
positive regulation of DNA repair
cellular response to stress
response to stress
regulation of response to stress
positive regulation of macromolecule metabolic process
regulation of nucleobase-containing compound metabolic process
positive regulation of cellular process
DNA repair
double-strand break repair
regulation of biological process
positive regulation of nucleobase-containing compound metabolic process
biological regulation
primary metabolic process
DNA metabolic process
regulation of macromolecule metabolic process
positive regulation of double-strand break repair
nucleic acid metabolic process
regulation of DNA repair
positive regulation of DNA metabolic process
regulation of response to stimulus
DNA damage response
metabolic process
cellular process
macromolecule metabolic process
regulation of metabolic process
regulation of DNA metabolic process
DNA replication
sexual reproduction
regulation of reproductive process
reproductive process
fertilization
regulation of fertilization
positive regulation of fertilization
positive regulation of reproductive process
positive regulation of organelle organization
regulation of cellular component organization
positive regulation of cellular component organization
meiotic cell cycle process
regulation of meiosis I
cellular component organization
meiosis I
positive regulation of cell cycle process
meiotic nuclear division
cellular component organization or biogenesis
cell cycle
regulation of cell cycle
cell cycle process
regulation of meiotic cell cycle
regulation of cell cycle process
organelle fission
meiotic cell cycle
positive regulation of nuclear division
positive regulation of meiotic cell cycle
regulation of organelle organization
positive regulation of cell cycle
regulation of meiotic nuclear division
organelle organization
nuclear division
meiosis I cell cycle process
positive regulation of meiosis I
regulation of nuclear division
positive regulation of meiotic nuclear division
demethylation
meiotic chromosome condensation
chromosome organization
chromosome organization involved in meiotic cell cycle
chromosome condensation
multicellular organismal process
egg-laying behavior
multicellular organismal reproductive process
regulation of egg-laying behavior
regulation of behavior
behavior
positive regulation of behavior
positive regulation of multicellular organismal process
positive regulation of egg-laying behavior
regulation of multicellular organismal process
reproductive behavior
regulation of chromosome organization
positive regulation of chromosome organization
Less
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
organelle
nucleus
intracellular membrane-bounded organelle
cellular anatomical entity
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B
,
C
,
D
IPR032857
Alpha-ketoglutarate-dependent dioxygenase alkB homologue 4
Family
A
,
B
,
C
,
D
IPR037151
Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Homologous Superfamily
About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy
Help
Contact Us
Documentation
Website FAQ
Glossary
Service Status
RCSB PDB (
citation
) is hosted by
RCSB PDB is a member of the
RCSB Partners
Nucleic Acid Knowledgebase
wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB