Annotations: 8H93

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, D	PF05729	NACHT domain (NACHT)	NACHT domain	This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation [1]. This family is closely related to Pfam:PF00931.	Domain
A, D	PF13516	Leucine Rich repeat (LRR_6)	Leucine Rich repeat	-	Repeat
A, D	PF17776	NLRC4 helical domain HD2 (NLRC4_HD2)	NLRC4 helical domain HD2	This entry represents a helical domain found in the NLRC4 protein [2] and NOD2 protein [1].	Domain
A, D	PF17779	NOD2 winged helix domain (NOD2_WH)	NOD2 winged helix domain	This winged helix domain is found in the NOD2 protein [1]. Its molecular function is not known.	Domain
C, F	PF16005	KH-like RNA-binding domain (MOEP19)	KH-like RNA-binding domain	MOEP19 is a family of mammalian KH-like RNA-binding motifs. The family is expressed during early embryogenesis. It appears to effect an early form of molecular asymmetry within the murine oocyte cytoplasm. The family marks a defined cortical cytoplas ...	MOEP19 is a family of mammalian KH-like RNA-binding motifs. The family is expressed during early embryogenesis. It appears to effect an early form of molecular asymmetry within the murine oocyte cytoplasm. The family marks a defined cortical cytoplasmic domain in oocytes and provides evidence for mammalian oocyte polarity and a form of pre-patterning that persists in zygotes and early embryos through the morula stage [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, D	NACHT, LRR and PYD domains-containing protein 5	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis regulation of localization localization regulation of biological process biological regulation developmental process anatomical structure morphogenesis animal organ development cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis regulation of localization localization regulation of biological process biological regulation developmental process anatomical structure morphogenesis animal organ development anatomical structure development animal organ morphogenesis protein localization cellular localization cellular macromolecule localization macromolecule localization sexual reproduction reproductive process fertilization multicellular organism development multicellular organismal process embryo development ending in birth or egg hatching chordate embryonic development embryo development in utero embryonic development multi-multicellular organism process female pregnancy embryo implantation multi-organism reproductive process regulation of cellular process catabolic process cellular biosynthetic process RNA metabolic process macromolecule catabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process post-transcriptional regulation of gene expression regulation of RNA metabolic process regulation of biological quality regulation of nucleobase-containing compound metabolic process RNA catabolic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process regulation of catabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound catabolic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process regulation of RNA stability nucleic acid catabolic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein stability regulated exocytosis transport regulation of reproductive process negative regulation of biological process vesicle-mediated transport negative regulation of fertilization secretion by cell cortical granule exocytosis single fertilization calcium-ion regulated exocytosis secretion egg activation cell activation export from cell regulation of fertilization establishment of localization exocytosis negative regulation of reproductive process prevention of polyspermy regulation of defense response response to stimulus regulation of response to external stimulus defense response regulation of inflammatory response response to external stimulus regulation of response to stimulus response to stress regulation of response to stress inflammatory response establishment of organelle localization microtubule cytoskeleton organization spindle localization organelle organization establishment of spindle localization organelle localization establishment of localization in cell microtubule-based process cell cycle cytoskeleton organization cell cycle process cell division regulation of cell division regulation of embryonic development regulation of multicellular organismal development regulation of developmental process positive regulation of biological process positive regulation of developmental process positive regulation of embryonic development positive regulation of multicellular organismal process regulation of multicellular organismal process actin cytoskeleton organization actin filament organization actin filament-based process supramolecular fiber organization	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen intracellular non-membrane-bounded organelle membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle cell periphery cell cortex intracellular vesicle endomembrane system cytoplasmic vesicle secretory granule secretory vesicle vesicle cortical granule cytosol protein-containing complex ooplasm Golgi apparatus subcortical maternal complex apical part of cell cell cortex region cytoplasmic region apical cortex
B, E	Transducin-like enhancer protein 6	transcription corepressor activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity	cellular component organization localization organelle organization organelle localization cellular process cellular component organization or biogenesis endoplasmic reticulum localization endoplasmic reticulum organization endomembrane system organization developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process cellular component organization localization organelle organization organelle localization cellular process cellular component organization or biogenesis endoplasmic reticulum localization endoplasmic reticulum organization endomembrane system organization developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process spermatogonial cell division developmental process involved in reproduction male gamete generation gamete generation cell division multicellular organismal process regulation of cellular process cellular developmental process regulation of developmental process positive regulation of biological process regulation of cell differentiation positive regulation of neuron differentiation positive regulation of developmental process neurogenesis multicellular organism development neuron differentiation positive regulation of cell differentiation cell differentiation anatomical structure development positive regulation of cellular process system development regulation of biological process biological regulation nervous system development generation of neurons regulation of neuron differentiation mitochondrion localization establishment of organelle localization cellular localization microtubule cytoskeleton organization spindle localization establishment of localization establishment of spindle localization establishment of localization in cell microtubule-based process cell cycle cytoskeleton organization cell cycle process regulation of cell division cellular response to stimulus response to stimulus signaling negative regulation of signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus negative regulation of signal transduction negative regulation of canonical Wnt signaling pathway regulation of response to stimulus regulation of cell communication regulation of embryonic development regulation of multicellular organismal development embryo development positive regulation of embryonic development positive regulation of multicellular organismal process regulation of multicellular organismal process positive regulation of nervous system development cell development regulation of neurogenesis regulation of cell development regulation of nervous system development positive regulation of neurogenesis positive regulation of cell development cellular biosynthetic process RNA metabolic process negative regulation of cellular metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II cellular metabolic process negative regulation of metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process actin cytoskeleton organization actin filament organization actin filament-based process supramolecular fiber organization	cell periphery cell cortex intracellular anatomical structure cytoplasm cellular anatomical entity protein-containing complex subcortical maternal complex cytosol transcription regulator complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
C, F	Oocyte-expressed protein homolog	RNA binding binding organic cyclic compound binding nucleic acid binding	cellular response to stimulus regulation of cellular process response to stimulus regulation of double-strand break repair positive regulation of biological process regulation of cellular response to stress regulation of primary metabolic process positive regulation of response to stimulus nucleobase-containing compound metabolic process positive regulation of metabolic process positive regulation of DNA repair cellular response to stress response to stress regulation of response to stress cellular response to stimulus regulation of cellular process response to stimulus regulation of double-strand break repair positive regulation of biological process regulation of cellular response to stress regulation of primary metabolic process positive regulation of response to stimulus nucleobase-containing compound metabolic process positive regulation of metabolic process positive regulation of DNA repair cellular response to stress response to stress regulation of response to stress positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process DNA repair double-strand break repair regulation of biological process positive regulation of nucleobase-containing compound metabolic process biological regulation primary metabolic process DNA metabolic process regulation of macromolecule metabolic process positive regulation of double-strand break repair nucleic acid metabolic process regulation of DNA repair positive regulation of DNA metabolic process regulation of response to stimulus DNA damage response metabolic process cellular process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process regulation of DNA recombination positive regulation of double-strand break repair via homologous recombination recombinational repair double-strand break repair via homologous recombination positive regulation of DNA recombination DNA recombination regulation of double-strand break repair via homologous recombination cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis DNA-templated DNA replication DNA replication DNA-templated DNA replication maintenance of fidelity replication fork processing protein localization regulation of localization establishment of protein localization cellular localization regulation of protein localization regulation of establishment of protein localization establishment of localization localization regulation of cellular localization cellular macromolecule localization macromolecule localization sexual reproduction reproductive process fertilization establishment of organelle localization microtubule cytoskeleton organization spindle localization organelle organization establishment of spindle localization organelle localization establishment of localization in cell microtubule-based process cell cycle cytoskeleton organization cell cycle process cell division regulation of cell division establishment or maintenance of bipolar cell polarity establishment or maintenance of apical/basal cell polarity establishment or maintenance of cell polarity developmental process multicellular organism development multicellular organismal process embryonic pattern specification anatomical structure development pattern specification process embryo development actin cytoskeleton organization actin filament organization actin filament-based process supramolecular fiber organization positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization regulation of reproductive process meiotic cell cycle process positive regulation of cell cycle process meiotic nuclear division regulation of cell cycle positive regulation of reproductive process regulation of meiotic cell cycle regulation of cell cycle process organelle fission meiotic cell cycle positive regulation of nuclear division positive regulation of meiotic cell cycle regulation of organelle organization positive regulation of cell cycle regulation of meiotic nuclear division nuclear division regulation of nuclear division positive regulation of meiotic nuclear division embryo development ending in birth or egg hatching chordate embryonic development in utero embryonic development multi-multicellular organism process female pregnancy embryo implantation multi-organism reproductive process	apical part of cell cellular anatomical entity cell periphery cell cortex intracellular anatomical structure cytoplasm protein-containing complex subcortical maternal complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, D	IPR007111	NACHT nucleoside triphosphatase	Domain
A, D	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, D	IPR041267	NACHT, LRR and PYD domains-containing protein, helical domain HD2	Domain
A, D	IPR001611	Leucine-rich repeat	Repeat
A, D	IPR041075	NOD1/2, winged helix domain	Domain
A, D	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
B, E	IPR009146	Groucho/transducin-like enhancer	Family
B, E	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
B, E	IPR001680	WD40 repeat	Repeat
B, E	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
C, F	IPR036612	K Homology domain, type 1 superfamily	Homologous Superfamily
C, F	IPR031952	KH-like RNA-binding domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.