8H5Y
Crystal structure of RadD- ADP complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | F_UNCLASSIFIED | e8h5yB3 | A: a+b complex topology | X: C-terminal domain of DNA repair helicase RadD (From Topology) | H: C-terminal domain of DNA repair helicase RadD (From Topology) | T: C-terminal domain of DNA repair helicase RadD | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth B] | PF00271 | e8h5yB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00271 | ECOD (1.6) |
A [auth B] | PF04851 | e8h5yB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF04851 | ECOD (1.6) |
A [auth B] | F_UNCLASSIFIED | e8h5yB4 | A: few secondary structure elements | X: Rubredoxin-like | H: Zinc finger domain of DNA repair helicase RadD (From Topology) | T: Zinc finger domain of DNA repair helicase RadD | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth A] | F_UNCLASSIFIED | e8h5yA3 | A: a+b complex topology | X: C-terminal domain of DNA repair helicase RadD (From Topology) | H: C-terminal domain of DNA repair helicase RadD (From Topology) | T: C-terminal domain of DNA repair helicase RadD | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth A] | PF00271 | e8h5yA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00271 | ECOD (1.6) |
B [auth A] | PF04851 | e8h5yA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF04851 | ECOD (1.6) |
B [auth A] | F_UNCLASSIFIED | e8h5yA4 | A: few secondary structure elements | X: Rubredoxin-like | H: Zinc finger domain of DNA repair helicase RadD (From Topology) | T: Zinc finger domain of DNA repair helicase RadD | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00271 | Helicase conserved C-terminal domain (Helicase_C) | Helicase conserved C-terminal domain | The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. | Domain |
A [auth B], B [auth A] | PF04851 | Type III restriction enzyme, res subunit (ResIII) | Type III restriction enzyme, res subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR006935 | Helicase/UvrB, N-terminal | Domain |
A [auth B], B [auth A] | IPR001650 | Helicase, C-terminal domain-like | Domain |
A [auth B], B [auth A] | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain |
A [auth B], B [auth A] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
A [auth B], B [auth A] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |