8G9U | pdb_00008g9u

Exploiting Activation and Inactivation Mechanisms in Type I-C CRISPR-Cas3 for Genome Editing Applications

External Resource: Annotation


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Distal nontarget DNA (5'-D(P*TP*TP*AP*TP*AP*TP*TP*AP*AP*TP*AP*TP*TP*AP*TP*AP*TP*TP*TP*A)-3')---
P [auth O]proximal nontarget strand DNA (5'-D(P*AP*TP*GP*AP*AP*CP*TP*TP*CP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')---
O [auth N]pre-crRNA processing endonuclease -
M [auth L]Traget strand DNA (53-MER)---
L [auth K]crRNA (43-MER)---
J [auth H]CRISPR-associated protein, Csd1 family- - -
H [auth I],
I [auth G],
K [auth J]		Phage associated protein- - -
CRISPR-associated protein, Csd2 family- -
A [auth P]Cas3 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
O [auth N]IPR021124CRISPR-associated protein, Cas5Family
O [auth N]IPR010155CRISPR pre-crRNA endoribonuclease Cas5dFamily
O [auth N]IPR013422CRISPR-associated protein Cas5, N-terminalDomain
J [auth H]IPR010144CRISPR-associated protein, Csd1-typeFamily
H [auth I],
I [auth G],
K [auth J]		IPR010144CRISPR-associated protein, Csd1-typeFamily
IPR006482CRISPR-associated protein Cas7, subtype I-B/I-CFamily
IPR013418Type I-C CRISPR-associated protein Cas7/Csd2Family
A [auth P]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A [auth P]IPR038257CRISPR-associated Cas3-type HD domain superfamilyHomologous Superfamily
A [auth P]IPR054712CRISPR-associated nuclease/helicase Cas3 domainDomain
A [auth P]IPR006474Helicase Cas3, CRISPR-associated, coreDomain
A [auth P]IPR011545DEAD/DEAH-box helicase domainDomain
A [auth P]IPR006674HD domainDomain
A [auth P]IPR006483CRISPR-associated Cas3-type, HD domainDomain
A [auth P]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily