Annotations: 8G5V

Empty capsid of Hepatitis B virus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
J [auth F]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
I [auth H]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
H [auth K]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
F [auth E]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
E [auth G]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)
A [auth B]	SCOP2B Superfamily	Hepatitis B viral capsid (hbcag)	8086389	3000581	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	MIF4G	e8g5vL1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
K [auth J]	MIF4G	e8g5vJ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
J [auth F]	MIF4G	e8g5vF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
I [auth H]	MIF4G	e8g5vH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
H [auth K]	MIF4G	e8g5vK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
G [auth I]	MIF4G	e8g5vI1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
F [auth E]	MIF4G	e8g5vE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
E [auth G]	MIF4G	e8g5vG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
D	MIF4G	e8g5vD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
C	MIF4G	e8g5vC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
B [auth A]	MIF4G	e8g5vA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
A [auth B]	MIF4G	e8g5vB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A], C, D, E [auth G], A [auth B], B [auth A], C, D, E [auth G], F [auth E], G [auth I], H [auth K], I [auth H], J [auth F], K [auth J], L	PF00906	Hepatitis core antigen (Hepatitis_core)	Hepatitis core antigen	The core antigen of hepatitis viruses possesses a carboxyl terminus rich in arginine. On this basis it was predicted that the core antigen would bind DNA [1]. There is some experimental evidence to support this [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A], C, D, E [auth G], A [auth B], B [auth A], C, D, E [auth G], F [auth E], G [auth I], H [auth K], I [auth H], J [auth F], K [auth J], L	Core protein Cp183	DNA binding binding nucleic acid binding structural molecule activity RNA binding	biological process involved in interspecies interaction between organisms microtubule-dependent intracellular transport of viral material microtubule-dependent intracellular transport of viral material towards nucleus intracellular transport of virus viral process viral life cycle transport of virus transport of viral material towards nucleus biological process involved in symbiotic interaction viral penetration into host nucleus symbiont entry into host cell symbiont entry into host biological process involved in interaction with host	host cellular component cellular anatomical structure host cell other organism part viral capsid icosahedral viral capsid T=4 icosahedral viral capsid virion component host intracellular part host cell cytoplasm host cell part host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A], C, D, E [auth G], A [auth B], B [auth A], C, D, E [auth G], F [auth E], G [auth I], H [auth K], I [auth H], J [auth F], K [auth J], L	IPR036459	Viral capsid core domain supefamily, Hepatitis B virus	Homologous Superfamily
A [auth B], B [auth A], C, D, E [auth G], A [auth B], B [auth A], C, D, E [auth G], F [auth E], G [auth I], H [auth K], I [auth H], J [auth F], K [auth J], L	IPR002006	Hepatitis core antigen	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.