8G4M
Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | gp120 core | 8080371 | 3001390 | SCOP2B (2022-06-29) |
C [auth G] | SCOP2B Superfamily | gp120 core | 8080371 | 3001390 | SCOP2B (2022-06-29) |
E [auth I] | SCOP2B Superfamily | gp120 core | 8080371 | 3001390 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Virus ectodomain | 8085620 | 3001628 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Virus ectodomain | 8085620 | 3001628 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Virus ectodomain | 8085620 | 3001628 | SCOP2B (2022-06-29) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
G [auth D], I [auth H], K [auth J] | Heavy Chain | IGHV3 | - | envelope glycoprotein gp41 | envelope glycoprotein gp120 | SAbDab (2024-10-04) |
H [auth E], J [auth L], L [auth K] | Light Chain | IGKV3 | Kappa | envelope glycoprotein gp41 | envelope glycoprotein gp120 | SAbDab (2024-10-04) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], C [auth G], E [auth I] | PF00516 | Envelope glycoprotein GP120 (GP120) | Envelope glycoprotein GP120 | - | Family |
B [auth A], D [auth B], F | PF00517 | Retroviral envelope protein (GP41) | Retroviral envelope protein | - | Family |