8EFP
CryoEM structure of GSDMB in complex with shigella IpaH7.8
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | F_UNCLASSIFIED | e8efpB1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e8efpC2 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e8efpC1 | A: a+b two layers | X: R3H domain-like | H: PUB domain (From Topology) | T: PUB domain | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth C] | PF04598 | Gasdermin pore forming domain (Gasdermin) | Gasdermin pore forming domain | The precise function of this protein is unknown. A deletion/insertion mutation is associated with an autosomal dominant non-syndromic hearing impairment form [1]. In addition, this protein has also been found to contribute to acquired etoposide resis ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Gasdermin (GSDM) Family | Gasdermin GSDMB pore |