HOIL-1/E2-Ub/Ub transthiolation complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyUBC-like 8034823 3000570 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyUBC-like 8034823 3000570 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HCadherine8eazH1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: CadherinECOD (v294.2)
GCadherine8eazG1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: CadherinECOD (v294.2)
FCadherine8eazF1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: CadherinECOD (v294.2)
ECadherine8eazE1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: CadherinECOD (v294.2)
DCadherine8eazD1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: CadherinECOD (v294.2)
CCadherine8eazC1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: CadherinECOD (v294.2)
BPeptidase_C1e8eazB1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Peptidase_C1ECOD (v294.2)
APeptidase_C1e8eazA1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Peptidase_C1ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E, F, G, H
PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
C, D
PF00179Ubiquitin-conjugating enzyme (UQ_con)Ubiquitin-conjugating enzymeProteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].
Domain
A, B
PF13445RING-type zinc-finger (zf-RING_UBOX)RING-type zinc-fingerThis zinc-finger is a typical RING-type of plant ubiquitin ligases [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E, F, G, H
Ubiquitin
C, D
Ubiquitin-conjugating enzyme E2 L3
A, B
RanBP-type and C3HC4-type zinc finger-containing protein 1