Annotations: 8D8J

Yeast mitochondrial small subunit assembly intermediate (State 1)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E [auth P]	SCOP2B Superfamily	Ribosomal protein S16	8066557	3000680	SCOP2B (2022-06-29)
P [auth L]	SCOP2B Superfamily	Nucleic acid-binding proteins	8098750	3000135	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G [auth R]	Cas_Cas7	e8d8jR1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Cas_Cas7	ECOD (v295.2)
E [auth P]	Cas_Cas7	e8d8jP1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Cas_Cas7	ECOD (v295.2)
P [auth L]	Cas_Cas7	e8d8jL1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Cas_Cas7	ECOD (v295.2)
N [auth H]	Cas_Cas7	e8d8jH1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Cas_Cas7	ECOD (v295.2)
L [auth F]	Cas_Cas7	e8d8jF1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Cas_Cas7	ECOD (v295.2)
K [auth E]	Cas_Cas7	e8d8jE1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Cas_Cas7	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L [auth F]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G [auth R]	PF01084	Ribosomal protein S18 (Ribosomal_S18)	Ribosomal protein S18	-	Family
F [auth Q]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
E [auth P]	PF00886	Ribosomal protein S16 (Ribosomal_S16)	Ribosomal protein S16	-	Family
D [auth O]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain
P [auth L]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	This protein is known as S12 in bacteria and archaea and S23 in eukaryotes.	Domain
N [auth H]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8		Domain
M [auth 6]	PF12298	Eukaryotic mitochondrial regulator protein (Bot1p)	Eukaryotic mitochondrial regulator protein	-	Family
L [auth F]	PF01250	Ribosomal protein S6 (Ribosomal_S6)	Ribosomal protein S6		Domain
K [auth E]	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain		Domain
K [auth E]	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain		Domain
J [auth D]	PF01535	PPR repeat (PPR)	PPR repeat	-	Repeat
J [auth D]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
A [auth 0]	PF09243	Mitochondrial small ribosomal subunit Rsm22 (Rsm22)	Mitochondrial small ribosomal subunit Rsm22	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth 2]	Protein FYV4, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
H [auth V]	37S ribosomal protein PET123, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
G [auth R]	37S ribosomal protein RSM18, mitochondrial	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
F [auth Q]	37S ribosomal protein S17, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
E [auth P]	37S ribosomal protein S16, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
D [auth O]	37S ribosomal protein S28, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
C [auth d]	Mitochondrial group I intron splicing factor CCM1	RNA binding binding rRNA binding nucleic acid binding	RNA splicing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing RNA splicing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process ribonucleoprotein complex biogenesis regulation of cellular process positive regulation of biological process rRNA processing positive regulation of rRNA processing regulation of primary metabolic process cellular component biogenesis positive regulation of metabolic process ribosome biogenesis regulation of RNA metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process cellular component organization or biogenesis rRNA metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process biological regulation regulation of macromolecule metabolic process regulation of rRNA processing positive regulation of RNA metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of metabolic process cellular component organization organelle organization mitochondrion organization mitochondrial gene expression mitochondrial RNA processing mitochondrial RNA metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
B [auth 5]	37S ribosomal protein MRP13, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
P [auth L]	uS12m	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane membraneless organelle intracellular membraneless organelle ribosome protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome organellar small ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit organelle lumen ribonucleoprotein complex
O [auth a]	15S ribosomal RNA	-	-	-
N [auth H]	37S ribosomal protein S8, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
M [auth 6]	37S ribosomal protein S35, mitochondrial	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
L [auth F]	37S ribosomal protein MRP17, mitochondrial	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
K [auth E]	37S ribosomal protein S5, mitochondrial	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
J [auth D]	37S ribosomal protein NAM9, mitochondrial	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process cellular component biogenesis ribosome biogenesis mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis ribosomal small subunit biogenesis	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
A [auth 0]	Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial	iron-sulfur cluster binding binding metal cluster binding small molecule binding transferase activity, transferring one-carbon groups transferase activity methyltransferase activity catalytic activity 4 iron, 4 sulfur cluster binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization mitochondrial small ribosomal subunit assembly membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization mitochondrial small ribosomal subunit assembly membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrial ribosome assembly ribosome assembly mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth 2]	IPR019083	Small ribosomal subunit protein mS41, SAM domain	Domain
I [auth 2]	IPR039603	Small ribosomal subunit protein mS41	Family
H [auth V]	IPR058940	Small ribosomal subunit protein mS26, fungi	Family
G [auth R]	IPR001648	Small ribosomal subunit protein bS18	Family
G [auth R]	IPR036870	Small ribosomal subunit protein bS18 superfamily	Homologous Superfamily
F [auth Q]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
F [auth Q]	IPR000266	Small ribosomal subunit protein uS17	Family
E [auth P]	IPR023803	Small ribosomal subunit protein bS16 domain superfamily	Homologous Superfamily
E [auth P]	IPR000307	Small ribosomal subunit protein bS16	Family
E [auth P]	IPR020592	Small ribosomal subunit protein bS16, conserved site	Conserved Site
D [auth O]	IPR005290	Small ribosomal subunit protein uS15, bacteria	Family
D [auth O]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
D [auth O]	IPR000589	Small ribosomal subunit protein uS15	Family
C [auth d]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
C [auth d]	IPR061939	Mitochondrial 15S rRNA processing factor CCM1, C-terminal domain	Domain
C [auth d]	IPR002885	Pentatricopeptide repeat	Repeat
B [auth 5]	IPR062442	MRP13, N-terminal domain	Domain
B [auth 5]	IPR063468	MRP13, C-terminal TPR repeats region	Domain
B [auth 5]	IPR059185	Small ribosomal subunit protein mS27, saccharomycetes	Family
P [auth L]	IPR006032	Small ribosomal subunit protein uS12	Family
P [auth L]	IPR005679	Ribosomal protein uS12, bacteria	Family
P [auth L]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
N [auth H]	IPR000630	Small ribosomal subunit protein uS8	Family
N [auth H]	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
M [auth 6]	IPR021036	Small ribosomal subunit protein mS45	Family
L [auth F]	IPR000529	Small ribosomal subunit protein bS6	Family
L [auth F]	IPR035980	Small ribosomal subunit protein bS6 superfamily	Homologous Superfamily
L [auth F]	IPR014717	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Homologous Superfamily
K [auth E]	IPR000851	Small ribosomal subunit protein uS5	Family
K [auth E]	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
K [auth E]	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
K [auth E]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
K [auth E]	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site	Conserved Site
K [auth E]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
J [auth D]	IPR018079	Small ribosomal subunit protein uS4, conserved site	Conserved Site
J [auth D]	IPR002942	RNA-binding S4 domain	Domain
J [auth D]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
J [auth D]	IPR022801	Small ribosomal subunit protein uS4	Family
A [auth 0]	IPR015324	Ribosomal protein Rsm22-like	Family
A [auth 0]	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A [auth 0]	IPR052571	Mitochondrial RNA Methyltransferase	Family
A [auth 0]	IPR016522	Ribosome assembly protein RSM22, mitochondrial, budding yeast	Family