8D6A
Cryo-EM structure of human LIF signaling complex: model containing the interaction core region
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | 4-helical cytokines | 8039173 | 3001717 | SCOP2B (2021-05-27) |
B [auth A] | SCOP2B Superfamily | Fibronectin type III | 8055533 | 3002063 | SCOP2B (2021-05-27) |
B [auth A] | SCOP2B Superfamily | Fibronectin type III | 8055145 | 3002063 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PF01291 | e8d6aD1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: PF01291 | ECOD (1.6) |
B [auth A] | F_UNCLASSIFIED | e8d6aA3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth A] | PF00041 | e8d6aA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00041 | ECOD (1.6) |
B [auth A] | PF09240 | e8d6aA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF09240 | ECOD (1.6) |
C [auth B] | F_UNCLASSIFIED | e8d6aB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth B] | PF00041 | e8d6aB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00041 | ECOD (1.6) |
C [auth B] | PF17971 | e8d6aB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF17971 | ECOD (1.6) |
C [auth B] | PF21177 | e8d6aB4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF21177 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D] | PF01291 | LIF / OSM family (LIF_OSM) | LIF / OSM family | - | Domain |
B [auth A] | PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | - | Domain |
B [auth A] | PF09240 | Interleukin-6 receptor alpha chain, binding (IL6Ra-bind) | Interleukin-6 receptor alpha chain, binding | Members of this family adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 [1]. | Domain |
C [auth B] | PF21177 | Leukemia inhibitory factor receptor, Ig-like domain (LIF-R_Ig-like) | Leukemia inhibitory factor receptor, Ig-like domain | This domain is found in Leukemia inhibitory factor receptor from mouse (LIF-R) and similar proteins from animals. LIF-R binds a cytokine that acts on many cell types including embryonic stem cells, megakaryocytes, osteoblasts, and neuronal cells. The ... | Domain |
C [auth B] | PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | - | Domain |