Annotations: 8D2W

Zebrafish MFSD2A isoform B in inward open ligand 2B conformation

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e8d2wB1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F:	ECOD (v295)
C		e8d2wC1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F:	ECOD (v295)
A		e8d2wA1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F:	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13347	MFS/sugar transport protein (MFS_2)	MFS/sugar transport protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	FAB light chain	-	-	-
C	FAB heavy chain	-	-	-
A	Sodium-dependent lysophosphatidylcholine symporter 1-B	monoatomic cation transmembrane transporter activity solute:sodium symporter activity solute:monoatomic cation symporter activity lipid transmembrane transporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity carbohydrate derivative transmembrane transporter activity lysophospholipid:sodium symporter activity active transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity organophosphate ester transmembrane transporter activity transmembrane transporter activity monoatomic cation transmembrane transporter activity solute:sodium symporter activity solute:monoatomic cation symporter activity lipid transmembrane transporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity carbohydrate derivative transmembrane transporter activity lysophospholipid:sodium symporter activity active transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity organophosphate ester transmembrane transporter activity transmembrane transporter activity symporter activity fatty acid transmembrane transporter activity monocarboxylic acid transmembrane transporter activity carboxylic acid transmembrane transporter activity	organic acid transport localization monocarboxylic acid transport carboxylic acid transport fatty acid transport transport macromolecule localization lipid localization lipid transport establishment of localization developmental process multicellular organismal process cellular developmental process establishment of blood-brain barrier organic acid transport localization monocarboxylic acid transport carboxylic acid transport fatty acid transport transport macromolecule localization lipid localization lipid transport establishment of localization developmental process multicellular organismal process cellular developmental process establishment of blood-brain barrier cell development nervous system development multicellular organism development central nervous system development cell differentiation anatomical structure development cellular process system development system process vascular transport circulatory system process vascular process in circulatory system lipid transport across blood-brain barrier transport across blood-brain barrier transcytosis vesicle-mediated transport membrane organization phospholipid translocation biological regulation phospholipid transport carbohydrate derivative transport lipid translocation regulation of membrane lipid distribution cellular component organization lysophospholipid transport lysophospholipid translocation cellular component organization or biogenesis regulation of biological quality organophosphate ester transport carbohydrate transport transmembrane transport	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR039672	Lactose permease-like	Family
A	IPR036259	MFS transporter superfamily	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM	Transmembrane	Alpha-helical polytopic	Major Facilitator Superfamily (MFS)	MFS lipid transporter

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Major Facilitator Superfamily (MFS) Transporters	MFSD2A lysolipid transporter, isoform B, inward open state, with bound lysolipid 1A,2B,3C merged conformation

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.