8CXG
Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth H] | PF07686 | e8cxgH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
E [auth h] | PF07686 | e8cxgh1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
K [auth 1] | PF07686 | e8cxg11 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth L] | PF07686 | e8cxgL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
F [auth l] | PF07686 | e8cxgl1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
L [auth 2] | PF07686 | e8cxg21 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth A] | PF02832 | e8cxgA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF02832 | ECOD (1.6) |
C [auth A] | PF00869 | e8cxgA1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: PF00869 | ECOD (1.6) |
C [auth A] | PF21659 | e8cxgA3 | A: alpha arrays | X: Transmembrane domain of envelope protein E (From Topology) | H: Transmembrane domain of envelope protein E (From Topology) | T: Transmembrane domain of envelope protein E | F: PF21659 | ECOD (1.6) |
G [auth B] | PF02832 | e8cxgB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF02832 | ECOD (1.6) |
G [auth B] | PF00869 | e8cxgB1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: PF00869 | ECOD (1.6) |
G [auth B] | PF21659 | e8cxgB3 | A: alpha arrays | X: Transmembrane domain of envelope protein E (From Topology) | H: Transmembrane domain of envelope protein E (From Topology) | T: Transmembrane domain of envelope protein E | F: PF21659 | ECOD (1.6) |
I [auth C] | PF02832 | e8cxgC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF02832 | ECOD (1.6) |
I [auth C] | PF00869 | e8cxgC2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: PF00869 | ECOD (1.6) |
I [auth C] | PF21659 | e8cxgC3 | A: alpha arrays | X: Transmembrane domain of envelope protein E (From Topology) | H: Transmembrane domain of envelope protein E (From Topology) | T: Transmembrane domain of envelope protein E | F: PF21659 | ECOD (1.6) |
D | PF01004 | e8cxgD1 | A: extended segments | X: Small envelope protein M (From Topology) | H: Small envelope protein M (From Topology) | T: Small envelope protein M | F: PF01004 | ECOD (1.6) |
H [auth E] | PF01004 | e8cxgE1 | A: extended segments | X: Small envelope protein M (From Topology) | H: Small envelope protein M (From Topology) | T: Small envelope protein M | F: PF01004 | ECOD (1.6) |
J [auth F] | PF01004 | e8cxgF1 | A: extended segments | X: Small envelope protein M (From Topology) | H: Small envelope protein M (From Topology) | T: Small envelope protein M | F: PF01004 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H], E [auth h], K [auth 1] | Heavy Chain | IGHV3 | - | ankyrin repeat family a protein 2,envelope e protein | SAbDab (2024-06-07) |
B [auth L], F [auth l], L [auth 2] | Light Chain | IGKV3 | Kappa | ankyrin repeat family a protein 2,envelope e protein | SAbDab (2024-06-07) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], G [auth B], I [auth C] | PF00869 | Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot) | Flavivirus glycoprotein, central and dimerisation domains | - | Domain |
C [auth A], G [auth B], I [auth C] | PF21659 | Flavivirus envelope glycoprotein E, stem/anchor domain (Flavi_E_stem) | Flavivirus envelope glycoprotein E, stem/anchor domain | This entry represents the stem/anchor domain found at the C-terminal of envelope glycoprotein E from Flavivirus. This domain comprises a stem region followed by two transmembrane anchor domains [1-5]. | Domain |
C [auth A], G [auth B], I [auth C] | PF02832 | Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C) | Flavivirus glycoprotein, immunoglobulin-like domain | - | Domain |
D, H [auth E], J [auth F] | PF01004 | Flavivirus envelope glycoprotein M (Flavi_M) | Flavivirus envelope glycoprotein M | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
C [auth A], G [auth B], I [auth C] | Q9H9E1 | :