8CSO
Crystal Structure of Orotidine 5'-phosphate decarboxylase from Klebsiella pneumoniae in complex with Uridine-5'-monophosphate
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Decarboxylase | 8107719 | 4003062 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8107720 | 3000216 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | OMPdecase | e8csoA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
E | OMPdecase | e8csoE1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
F | OMPdecase | e8csoF1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
I | OMPdecase | e8csoI1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
B | OMPdecase | e8csoB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
C | OMPdecase | e8csoC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
D | OMPdecase | e8csoD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
G | OMPdecase | e8csoG1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
H | OMPdecase | e8csoH1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
J | OMPdecase | e8csoJ1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: OMPdecase | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00215 | Orotidine 5'-phosphate decarboxylase / HUMPS family (OMPdecase) | Orotidine 5'-phosphate decarboxylase / HUMPS family | This family includes Orotidine 5'-phosphate decarboxylase enzymes EC:4.1.1.23 that are involved in the final step of pyrimidine biosynthesis. The family also includes enzymes such as hexulose-6-phosphate synthase. This family appears to be distantly ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018089 | Orotidine 5'-phosphate decarboxylase, active site | Active Site | |
IPR011060 | Ribulose-phosphate binding barrel | Homologous Superfamily | |
IPR047596 | Orotidine 5'-phosphate decarboxylase, bacterial | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR001754 | Orotidine 5'-phosphate decarboxylase domain | Domain | |
IPR014732 | Orotidine 5'-phosphate decarboxylase | Family |