8CSL

Sub-tomogram averaging of erythrocyte ankyrin-1 complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyAnkyrin repeat 8057716 3000154 SCOP2B (2022-06-29)
J [auth V]SCOP2B SuperfamilyNucleobase/cation symporter 2, NCS2-like 8092954 3002647 SCOP2B (2022-06-29)
J [auth V]SCOP2B SuperfamilyPhoshotransferase/anion transport protein 8033412 3000490 SCOP2B (2022-06-29)
K [auth e]SCOP2B SuperfamilyNucleobase/cation symporter 2, NCS2-like 8092954 3002647 SCOP2B (2022-06-29)
K [auth e]SCOP2B SuperfamilyPhoshotransferase/anion transport protein 8033412 3000490 SCOP2B (2022-06-29)
N [auth Y]SCOP2B SuperfamilyPhoshotransferase/anion transport protein 8033412 3000490 SCOP2B (2022-06-29)
N [auth Y]SCOP2B SuperfamilyNucleobase/cation symporter 2, NCS2-like 8092954 3002647 SCOP2B (2022-06-29)
O [auth f]SCOP2B SuperfamilyNucleobase/cation symporter 2, NCS2-like 8092954 3002647 SCOP2B (2022-06-29)
O [auth f]SCOP2B SuperfamilyPhoshotransferase/anion transport protein 8033412 3000490 SCOP2B (2022-06-29)
R [auth Z]SCOP2B SuperfamilyNucleobase/cation symporter 2, NCS2-like 8092954 3002647 SCOP2B (2022-06-29)
R [auth Z]SCOP2B SuperfamilyPhoshotransferase/anion transport protein 8033412 3000490 SCOP2B (2022-06-29)
S [auth g]SCOP2B SuperfamilyPhoshotransferase/anion transport protein 8033412 3000490 SCOP2B (2022-06-29)
S [auth g]SCOP2B SuperfamilyNucleobase/cation symporter 2, NCS2-like 8092954 3002647 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAnk_2e8cslA1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Ankyrin repeat (From Topology)T: Ankyrin repeatF: Ank_2ECOD (1.6)
J [auth V]HCO3_cotranspe8cslV1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: HCO3_cotranspECOD (1.6)
J [auth V]Band_3_cytoe8cslV2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: Band_3_cytoECOD (1.6)
K [auth e]HCO3_cotranspe8csle1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: HCO3_cotranspECOD (1.6)
K [auth e]Band_3_cytoe8csle2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: Band_3_cytoECOD (1.6)
N [auth Y]HCO3_cotranspe8cslY1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: HCO3_cotranspECOD (1.6)
N [auth Y]Band_3_cytoe8cslY2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: Band_3_cytoECOD (1.6)
O [auth f]HCO3_cotranspe8cslf1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: HCO3_cotranspECOD (1.6)
O [auth f]Band_3_cytoe8cslf2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: Band_3_cytoECOD (1.6)
R [auth Z]HCO3_cotranspe8cslZ1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: HCO3_cotranspECOD (1.6)
R [auth Z]Band_3_cytoe8cslZ2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: Band_3_cytoECOD (1.6)
S [auth g]HCO3_cotranspe8cslg1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: HCO3_cotranspECOD (1.6)
S [auth g]Band_3_cytoe8cslg2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: Band_3_cytoECOD (1.6)
C [auth K]F_UNCLASSIFIEDe8cslK1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: F_UNCLASSIFIEDECOD (1.6)
D [auth L]Ammonium_transp_1e8cslL1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: Ammonium_transp_1ECOD (1.6)
E [auth Q]Ammonium_transp_1e8cslQ1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: Ammonium_transp_1ECOD (1.6)
F [auth X]Transglut_Ne8cslX4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Transglut_NECOD (1.6)
F [auth X]Transglut_C_1e8cslX1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Transglut_C_1ECOD (1.6)
F [auth X]Transglut_Ce8cslX3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Transglut_CECOD (1.6)
F [auth X]Transglut_coree8cslX2 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: Transglut_coreECOD (1.6)
G [auth P]Glycophorin_Ae8cslP1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: Glycophorin_AECOD (1.6)
H [auth R]Glycophorin_Ae8cslR1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: Glycophorin_AECOD (1.6)
I [auth a]Glycophorin_Ae8csla1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: Glycophorin_AECOD (1.6)
L [auth S]Glycophorin_Ae8cslS1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: Glycophorin_AECOD (1.6)
M [auth b]Glycophorin_Ae8cslb1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: Glycophorin_AECOD (1.6)
P [auth T]Glycophorin_Ae8cslT1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: Glycophorin_AECOD (1.6)
Q [auth c]Glycophorin_Ae8cslc1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: Glycophorin_AECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00023Ankyrin repeat (Ank)Ankyrin repeat- Repeat
PF00955HCO3- transporter integral membrane domain (HCO3_cotransp)HCO3- transporter integral membrane domainThis family contains Band 3 anion exchange proteins that exchange CL-/HCO3- such as Swiss:P48751. This family also includes cotransporters of Na+/HCO3- such as Swiss:O15153.Domain
PF07565Band 3 cytoplasmic domain (Band_3_cyto)Band 3 cytoplasmic domainThis family contains the cytoplasmic domain of the Band 3 anion exchange proteins that exchange Cl-/HCO3-. Band 3 constitutes the most abundant polypeptide in the red blood cell membrane, comprising 25% of the total membrane protein. The cytoplasmic ...This family contains the cytoplasmic domain of the Band 3 anion exchange proteins that exchange Cl-/HCO3-. Band 3 constitutes the most abundant polypeptide in the red blood cell membrane, comprising 25% of the total membrane protein. The cytoplasmic domain of band 3 functions primarily as an anchoring site for other membrane-associated proteins. Included among the protein ligands of cdb3 are ankyrin, protein 4.2, protein 4.1, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), phosphofructokinase, aldolase, hemoglobin, hemichromes, and the protein tyrosine kinase (p72syk). [1]
Domain
C [auth K]PF00909Ammonium Transporter Family (Ammonium_transp)Ammonium Transporter Family- Family
D [auth L],
E [auth Q]
PF00909Ammonium Transporter Family (Ammonium_transp)Ammonium Transporter Family- Family
F [auth X]PF00868Transglutaminase family (Transglut_N)Transglutaminase family- Domain
F [auth X]PF00927Transglutaminase family, C-terminal ig like domain (Transglut_C)Transglutaminase family, C-terminal ig like domain- Domain
F [auth X]PF01841Transglutaminase-like superfamily (Transglut_core)Transglutaminase-like superfamily- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ankyrin-1
Band 3 anion transport protein
C [auth K]Blood group Rh(CE) polypeptide
D [auth L],
E [auth Q]
Ammonium transporter Rh type A
F [auth X]Protein 4.2
G [auth P]Glycophorin-B- -
Glycophorin-A -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036770Ankyrin repeat-containing domain superfamilyHomologous Superfamily
IPR040745Ankyrin, UPA domainDomain
IPR000906ZU5 domainDomain
IPR002110Ankyrin repeatRepeat
IPR011029Death-like domain superfamilyHomologous Superfamily
IPR000488Death domainDomain
IPR013769Band 3 cytoplasmic domainDomain
IPR001717Anion exchange proteinFamily
IPR003020Bicarbonate transporter, eukaryoticFamily
IPR011531Bicarbonate transporter-like, transmembrane domainDomain
IPR002977Anion exchange protein 1Family
IPR016152Phosphotransferase/anion transporterHomologous Superfamily
IPR018241Anion exchange, conserved siteConserved Site
C [auth K]IPR002229Blood group Rhesus C/E/D polypeptideFamily
C [auth K]IPR029020Ammonium/urea transporterHomologous Superfamily
C [auth K]IPR024041Ammonium transporter AmtB-like domainDomain
D [auth L],
E [auth Q]
IPR002229Blood group Rhesus C/E/D polypeptideFamily
D [auth L],
E [auth Q]
IPR029020Ammonium/urea transporterHomologous Superfamily
D [auth L],
E [auth Q]
IPR024041Ammonium transporter AmtB-like domainDomain
F [auth X]IPR036985Transglutaminase-like superfamilyHomologous Superfamily
F [auth X]IPR036238Transglutaminase, C-terminal domain superfamilyHomologous Superfamily
F [auth X]IPR013808Transglutaminase, active siteActive Site
F [auth X]IPR013783Immunoglobulin-like foldHomologous Superfamily
F [auth X]IPR002931Transglutaminase-likeDomain
F [auth X]IPR014756Immunoglobulin E-setHomologous Superfamily
F [auth X]IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
F [auth X]IPR001102Transglutaminase, N-terminalDomain
F [auth X]IPR008958Transglutaminase, C-terminalDomain
F [auth X]IPR050779Protein-glutamine gamma-glutamyltransferasesFamily
F [auth X]IPR023608Protein-glutamine gamma-glutamyltransferase, animalFamily
G [auth P]IPR018938Glycophorin, conserved siteConserved Site
G [auth P]IPR001195GlycophorinFamily
G [auth P]IPR049535Glycophorin A/BFamily
IPR018938Glycophorin, conserved siteConserved Site
IPR001195GlycophorinFamily
IPR049535Glycophorin A/BFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP16157
PharosP02730
C [auth K]PharosP18577
D [auth L],
E [auth Q]
PharosQ02094
F [auth X]PharosP16452
G [auth P]PharosP06028
PharosP02724