8C9N | pdb_00008c9n

MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 1]	TSP_1	e8c9n101	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: TSP_1	ECOD (v295)
AA	Ferritin	e8c9nAA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
AB	Ferritin	e8c9nAB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
B [auth A]	Ferritin	e8c9nA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
BA	Ferritin	e8c9nBA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
BB	Ferritin	e8c9nBB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
C [auth B]	Ferritin	e8c9nB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
CA	Ferritin	e8c9nCA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
CB	Ferritin	e8c9nCB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
D [auth C]	Ferritin	e8c9nC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
DA	Ferritin	e8c9nDA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
DB	Ferritin	e8c9nDB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
E [auth D]	Ferritin	e8c9nD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
EA	Ferritin	e8c9nEA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
EB	Ferritin	e8c9nEB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
F [auth E]	Ferritin	e8c9nE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
FA	Ferritin	e8c9nFA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
FB	Ferritin	e8c9nFB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
G [auth F]	Ferritin	e8c9nF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
GA	Ferritin	e8c9nGA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
GB	Ferritin	e8c9nGB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
H [auth G]	Ferritin	e8c9nG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
HA	Ferritin	e8c9nHA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
HB	Ferritin	e8c9nHB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
I [auth H]	Ferritin	e8c9nH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
IA	Ferritin	e8c9nIA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
J [auth I]	Ferritin	e8c9nI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
JA	Ferritin	e8c9nJA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
K [auth J]	Ferritin	e8c9nJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
KA	Ferritin	e8c9nKA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
L [auth K]	Ferritin	e8c9nK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
LA	Ferritin	e8c9nLA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
M [auth L]	Ferritin	e8c9nL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
MA	Ferritin	e8c9nMA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
N [auth M]	Ferritin	e8c9nM1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
NA	Ferritin	e8c9nNA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
O [auth N]	Ferritin	e8c9nN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
OA	Ferritin	e8c9nOA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
P [auth O]	Ferritin	e8c9nO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
PA	Ferritin	e8c9nPA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
Q [auth P]	Ferritin	e8c9nP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
QA	Ferritin	e8c9nQA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
R [auth Q]	Ferritin	e8c9nQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
RA	Ferritin	e8c9nRA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
S [auth R]	Ferritin	e8c9nR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
SA	Ferritin	e8c9nSA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
T [auth S]	Ferritin	e8c9nS1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
TA	Ferritin	e8c9nTA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
U [auth T]	Ferritin	e8c9nT1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
UA	Ferritin	e8c9nUA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
V	Ferritin	e8c9nV1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
VA	Ferritin	e8c9nVA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
W	Ferritin	e8c9nW1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
WA	Ferritin	e8c9nWA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
X	Ferritin	e8c9nX1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
XA	Ferritin	e8c9nXA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
Y	Ferritin	e8c9nY1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
YA	Ferritin	e8c9nYA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
Z	Ferritin	e8c9nZ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)
ZA	Ferritin	e8c9nZA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ferritin	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1], AA, AB, B [auth A], BA, A [auth 1], AA, AB, B [auth A], BA, BB, C [auth B], CA, CB, D [auth C], DA, DB, E [auth D], EA, EB, F [auth E], FA, FB, G [auth F], GA, GB, H [auth G], HA, HB, I [auth H], IA, J [auth I], JA, K [auth J], KA, L [auth K], LA, M [auth L], MA, N [auth M], NA, O [auth N], OA, P [auth O], PA, Q [auth P], QA, R [auth Q], RA, S [auth R], SA, T [auth S], TA, U [auth T], UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	Penton protein	structural molecule activity cation binding ion binding binding metal ion binding small molecule binding	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell	host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle viral capsid icosahedral viral capsid virion component T=25 icosahedral viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1], AA, AB, B [auth A], BA, A [auth 1], AA, AB, B [auth A], BA, BB, C [auth B], CA, CB, D [auth C], DA, DB, E [auth D], EA, EB, F [auth E], FA, FB, G [auth F], GA, GB, H [auth G], HA, HB, I [auth H], IA, J [auth I], JA, K [auth J], KA, L [auth K], LA, M [auth L], MA, N [auth M], NA, O [auth N], OA, P [auth O], PA, Q [auth P], QA, R [auth Q], RA, S [auth R], SA, T [auth S], TA, U [auth T], UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA	IPR002605	Adenovirus penton base protein	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.