8BGU | pdb_00008bgu

human MDM2-5S RNP


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth F]SCOP2B SuperfamilyRan binding protein zinc finger-like 8039462 3000133 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyRL5-like 8073892 3001709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth F]MRS2-likee8bguF1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295)
D [auth B]MRS2-likee8bguB1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: MRS2-likeECOD (v295)
C [auth A]Lipoprotein_18e8bguA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Lipoprotein_18ECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth F]PF00641Zn-finger in Ran binding protein and others (Zn_ribbon_RanBP)Zn-finger in Ran binding protein and othersDomain
D [auth B]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
D [auth B]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
C [auth A]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth F]E3 ubiquitin-protein ligase Mdm2
B [auth 3]5S rRNA---
D [auth B]60S ribosomal protein L11
C [auth A]60S ribosomal protein L5

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth F]Q00987
D [auth B]P62913
C [auth A]P46777