8BFT
The E. coli TrpD2 protein YbiB in complex with a C-terminal peptide from ObgE
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glycos_trans_3N | e8bftA1 | A: alpha arrays | X: Nucleoside phosphorylase/phosphoribosyltransferase-N (From Topology) | H: Nucleoside phosphorylase/phosphoribosyltransferase-N (From Topology) | T: Nucleoside phosphorylase/phosphoribosyltransferase-N | F: Glycos_trans_3N | ECOD (1.6) |
A | Glycos_transf_3 | e8bftA2 | A: a/b three-layered sandwiches | X: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain (From Topology) | H: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain (From Topology) | T: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | F: Glycos_transf_3 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02885 | Glycosyl transferase family, helical bundle domain (Glycos_trans_3N) | Glycosyl transferase family, helical bundle domain | This family includes anthranilate phosphoribosyltransferase (TrpD), thymidine phosphorylase. All these proteins can transfer a phosphorylated ribose substrate. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR035902 | Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily | Homologous Superfamily | |
IPR036320 | Glycosyl transferase family 3, N-terminal domain superfamily | Homologous Superfamily | |
IPR005940 | Anthranilate phosphoribosyl transferase | Family | |
IPR017459 | Glycosyl transferase family 3, N-terminal domain | Domain | |
IPR031167 | OBG-type guanine nucleotide-binding (G) domain | Domain | |
IPR045086 | OBG-type GTPase | Family | |
IPR036726 | GTP1/OBG domain superfamily | Homologous Superfamily | |
IPR014100 | GTP-binding protein Obg/CgtA | Family | |
IPR006074 | GTP1/OBG, conserved site | Conserved Site | |
IPR006169 | GTP1/OBG domain | Domain | |
IPR006073 | GTP binding domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |