Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyE set domains 8055093 3000070 SCOP2B (2022-06-29)
A [auth B]SCOP2B SuperfamilyBrl domain-like 8036193 3000115 SCOP2B (2022-06-29)
B [auth J]SCOP2B SuperfamilyJAB1/MPN domain-like 8053277 3001105 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]F_UNCLASSIFIEDe8bc9B9 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
A [auth B]F_UNCLASSIFIEDe8bc9B3 A: alpha arraysX: HTHH: HTHT: wingedF: F_UNCLASSIFIEDECOD (1.6)
A [auth B]F_UNCLASSIFIEDe8bc9B11 A: alpha arraysX: HhH/H2THH: SAM-like subdomain in Sec63-like proteins (From Topology)T: SAM-like subdomain in Sec63-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
A [auth B]F_UNCLASSIFIEDe8bc9B4 A: alpha arraysX: Sec63 N-terminal subdomain-like (From Topology)H: Sec63 N-terminal subdomain-like (From Topology)T: Sec63 N-terminal subdomain-likeF: F_UNCLASSIFIEDECOD (1.6)
A [auth B]F_UNCLASSIFIEDe8bc9B7 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: F_UNCLASSIFIEDECOD (1.6)
B [auth J]F_UNCLASSIFIEDe8bc9J1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF02889Sec63 Brl domain (Sec63)Sec63 Brl domain- Family
A [auth B]PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
A [auth B]PF00271Helicase conserved C-terminal domain (Helicase_C)Helicase conserved C-terminal domainThe Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.Domain
B [auth J]PF08084PROCT (NUC072) domain (PROCT)PROCT (NUC072) domainThe PROCT domain is the C-terminal domain in pre-mRNA splicing factors of PRO8 family [1].Domain
B [auth J]PF01398JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)JAB1/Mov34/MPN/PAD-1 ubiquitin protease- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]U5 small nuclear ribonucleoprotein 200 kDa helicase
B [auth J]Pre-mRNA-processing-splicing factor 8

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR048863Pre-mRNA-splicing helicase BRR2-like, plug domainDomain
A [auth B]IPR041094Brr2, N-terminal helicase PWI domainDomain
A [auth B]IPR004179Sec63 domainDomain
A [auth B]IPR014756Immunoglobulin E-setHomologous Superfamily
A [auth B]IPR011545DEAD/DEAH box helicase domainDomain
A [auth B]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth B]IPR050474Helicase Hel308/SKI2-likeFamily
A [auth B]IPR001650Helicase, C-terminal domain-likeDomain
A [auth B]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A [auth B]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A [auth B]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
A [auth B]IPR035892C2 domain superfamilyHomologous Superfamily
B [auth J]IPR012984PROCT domainDomain
B [auth J]IPR012591PRO8NT domainDomain
B [auth J]IPR019580Pre-mRNA-processing-splicing factor 8, U6-snRNA-bindingDomain
B [auth J]IPR027652Pre-mRNA-processing-splicing factor 8Family
B [auth J]IPR043172Prp8 RNase domain IV, palm regionHomologous Superfamily
B [auth J]IPR012592PROCN domainDomain
B [auth J]IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
B [auth J]IPR043173Prp8 RNase domain IV, fingers regionHomologous Superfamily
B [auth J]IPR021983PRP8 domain IV coreDomain
B [auth J]IPR019581Pre-mRNA-processing-splicing factor 8, U5-snRNA-bindingDomain
B [auth J]IPR037518MPN domainDomain
B [auth J]IPR019582RNA recognition motif, spliceosomal PrP8Domain
B [auth J]IPR042516Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain superfamilyHomologous Superfamily
B [auth J]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain