Crystal structure of radical SAM epimerase EpeE C223A mutant from Bacillus subtilis with [4Fe-4S] clusters, S-adenosyl-L-homocysteine and RiPP peptide 6 bound
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF04055 | Radical SAM superfamily (Radical_SAM) | Radical SAM superfamily | Radical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. | Domain | |
| PF13353 | 4Fe-4S single cluster domain (Fer4_12) | 4Fe-4S single cluster domain | This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative exported peptide YydF | - | - | - | |
| Putative peptide biosynthesis protein YydG | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR023898 | Putative exported peptide YydF-like | Family | |
| IPR007197 | Radical SAM | Domain | |
| IPR058240 | Radical SAM superfamily | Homologous Superfamily | |
| IPR023904 | Peptide radical SAM maturase , YydG | Family | |
| IPR050377 | Radical SAM PqqA peptide cyclase/Mycofactocin maturase MftC-like | Family | |
| IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily |














