Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiense in holo form with PLP
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | CoV_S1_C | e8ahrB1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CoV_S1_C | ECOD (v294.2) |
| A | CoV_S1_C | e8ahrA1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CoV_S1_C | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01063 | Amino-transferase class IV (Aminotran_4) | Amino-transferase class IV | The D-amino acid transferases (D-AAT) are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the diff ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Aminotransferase class IV |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050571 | Class-IV Pyridoxal-Phosphate-Dependent Aminotransferase | Family | |
| IPR043132 | Branched-chain-amino-acid aminotransferase-like, C-terminal | Homologous Superfamily | |
| IPR043131 | Branched-chain-amino-acid aminotransferase-like, N-terminal | Homologous Superfamily | |
| IPR001544 | Aminotransferase class IV | Family | |
| IPR036038 | Aminotransferase-like, PLP-dependent enzymes | Homologous Superfamily |














