8AD4
X-ray structure of NqrF(129-408)of Vibrio cholerae in complex with NADH
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00970 | e8ad4A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF00970 | ECOD (1.6) |
A | PF00175 | e8ad4A2 | A: a/b three-layered sandwiches | X: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | H: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | T: Ferredoxin reductase-like, C-terminal NADP-linked domain | F: PF00175 | ECOD (1.6) |
B | PF00970 | e8ad4B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF00970 | ECOD (1.6) |
B | PF00175 | e8ad4B2 | A: a/b three-layered sandwiches | X: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | H: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | T: Ferredoxin reductase-like, C-terminal NADP-linked domain | F: PF00175 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00175 | Oxidoreductase NAD-binding domain (NAD_binding_1) | Oxidoreductase NAD-binding domain | Xanthine dehydrogenases, that also bind FAD/NAD, have essentially no similarity. | Domain | |
PF00970 | Oxidoreductase FAD-binding domain (FAD_binding_6) | Oxidoreductase FAD-binding domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010205 | Na(+)-translocating NADH-quinone reductase subunit F | Family | |
IPR001433 | Oxidoreductase FAD/NAD(P)-binding | Domain | |
IPR036010 | 2Fe-2S ferredoxin-like superfamily | Homologous Superfamily | |
IPR001041 | 2Fe-2S ferredoxin-type iron-sulfur binding domain | Domain | |
IPR039261 | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain | Homologous Superfamily | |
IPR008333 | Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain | Domain | |
IPR017938 | Riboflavin synthase-like beta-barrel | Homologous Superfamily | |
IPR017927 | FAD-binding domain, ferredoxin reductase-type | Domain | |
IPR012675 | Beta-grasp domain superfamily | Homologous Superfamily |