8AAN | pdb_00008aan

The nucleoprotein complex of Rep protein with iteron containing dsDNA and DUE ssDNA.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyWinged helix DNA-binding domain 8002854 3000034 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyWinged helix DNA-binding domain 8002855 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]MaoC_dehydratase8aanA1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: MaoC_dehydratasECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A]Replication initiation protein -
DNA (5'-D(*AP*TP*TP*TP*TP*TP*AP*T)-3')---
B [auth C]DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*T)-3')---
A [auth B]DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*T)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR000525Initiator Rep protein, WH1 domainDomain
C [auth A]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth A]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily