Annotations: 8A93

Complex of RecF-RecR-DNA from Thermus thermophilus.

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E [auth F]	Tlr3_TMD	e8a93F1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Tlr3_TMD	ECOD (v294.2)
D	Tlr3_TMD	e8a93D1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Tlr3_TMD	ECOD (v294.2)
B	Tlr3_TMD	e8a93B1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Tlr3_TMD	ECOD (v294.2)
A	Tlr3_TMD	e8a93A1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Tlr3_TMD	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.8.420	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C, D, E [auth F]	PF21176	RecR, helix-hairpin-helix (RecR_HhH)	RecR, helix-hairpin-helix	-	Motif
C, D, E [auth F]	PF13662	Toprim domain (Toprim_4)	Toprim domain	The toprim domain is found in a wide variety of enzymes involved in nucleic acid manipulation [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth Y]	Oligo2	-	-	-
F [auth X]	Oligo1	-	-	-
C, D, E [auth F]	Recombination protein RecR	DNA binding binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process macromolecule metabolic process DNA repair DNA recombination	-
A, B	DNA replication and repair protein RecF	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding single-stranded DNA binding nucleic acid binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular response to stimulus double-strand break repair response to stimulus cellular response to stress DNA damage response response to stress nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular response to stimulus double-strand break repair response to stimulus cellular response to stress DNA damage response response to stress DNA repair SOS response nucleobase-containing compound biosynthetic process DNA synthesis involved in DNA repair macromolecule biosynthetic process nucleic acid biosynthetic process biosynthetic process DNA biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D, E [auth F]	IPR023627	Recombination protein RecR	Homologous Superfamily
C, D, E [auth F]	IPR006171	TOPRIM domain	Domain
C, D, E [auth F]	IPR015967	Recombination protein RecR, zinc finger domain	Domain
C, D, E [auth F]	IPR000093	DNA recombination protein RecR	Family
C, D, E [auth F]	IPR003583	Helix-hairpin-helix DNA-binding motif, class 1	Domain
C, D, E [auth F]	IPR034137	RecR, TOPRIM domain	Domain
A, B	IPR042174	DNA-binding RecF, domain 2	Homologous Superfamily
A, B	IPR001238	DNA-binding, RecF	Family
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

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