7YRN

Cyro-EM structure of HCMV glycoprotein B in complex with 1B03 Fab

External Resource: Annotation


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth D],
E [auth F],
H		Heavy ChainIGHV5 -envelope glycoprotein bSAbDab (2024-08-30)
C [auth E],
F [auth G],
I		Light ChainIGKV1 Kappaenvelope glycoprotein bSAbDab (2024-08-30)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth B],
G [auth C]		PF00606Herpesvirus Glycoprotein B ectodomain (Glycoprotein_B)Herpesvirus Glycoprotein B ectodomainThis domain corresponds to the ectodomain of glycoprotein B according to ECOD.Domain
A,
D [auth B],
G [auth C]		PF17417Herpesvirus Glycoprotein B PH-like domain (Glycoprot_B_PH2)Herpesvirus Glycoprotein B PH-like domainThis domain corresponds to the second PH-like domain in herpesvirus glycoprotein B.Domain
A,
D [auth B],
G [auth C]		PF17416Herpesvirus Glycoprotein B (Glycoprot_B_PH1)Herpesvirus Glycoprotein BThis domain has a PH-like fold.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
D [auth B],
G [auth C]		Envelope glycoprotein B-
B [auth D],
E [auth F],
H		1B03 Fab antibody Heavy Chain---
C [auth E],
F [auth G],
I		1B03 Fab antibody Light Chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D [auth B],
G [auth C]		IPR000234Herpesvirus Glycoprotein BFamily
A,
D [auth B],
G [auth C]		IPR035381Herpesvirus Glycoprotein B, PH-like domain 2Domain
A,
D [auth B],
G [auth C]		IPR035377Herpesvirus Glycoprotein B, PH-like domain 1Domain
A,
D [auth B],
G [auth C]		IPR038631Herpesvirus Glycoprotein B, PH-like domain 2 superfamilyHomologous Superfamily
A,
D [auth B],
G [auth C]		IPR021044Herpesvirus Glycoprotein B, antigenic domain, N-terminalDomain