Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth L] | Proton_antipo_M,Proton_antipo_N | e7yp2L01 | A: beta barrels | X: Fe-binding domain in prismane-like proteins | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Proton_antipo_M,Proton_antipo_N | ECOD (v294.2) |
| B [auth H] | Proton_antipo_M,Proton_antipo_N | e7yp2H01 | A: beta barrels | X: Fe-binding domain in prismane-like proteins | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Proton_antipo_M,Proton_antipo_N | ECOD (v294.2) |
| A | Proton_antipo_M,Proton_antipo_N | e7yp2A01 | A: beta barrels | X: Fe-binding domain in prismane-like proteins | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Proton_antipo_M,Proton_antipo_N | ECOD (v294.2) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| C [auth L] | Light Chain | IGKV8 | Kappa | envelope glycoprotein h | SAbDab (2026-05-08) |
| B [auth H] | Heavy Chain | IGHV4 | - | envelope glycoprotein h | SAbDab (2026-05-08) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF17488 | Herpesvirus glycoprotein H C-terminal domain (Herpes_glycoH_C) | Herpesvirus glycoprotein H C-terminal domain | Herpesvirus glycoprotein H (gH) is a virion associated envelope glycoprotein [2]. Complex formation between gH and gL has been demonstrated in both virions and infected cells [1]. This entry represents the C-terminal domain. | Domain | |
| PF02489 | Herpesvirus glycoprotein H main domain (Herpes_glycop_H) | Herpesvirus glycoprotein H main domain | Herpesvirus glycoprotein H (gH) is a virion associated envelope glycoprotein [2]. Complex formation between gH and gL has been demonstrated in both virions and infected cells [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038172 | Herpesvirus glycoprotein H, C-terminal domain superfamily | Homologous Superfamily | |
| IPR003493 | Herpesvirus glycoprotein H | Family | |
| IPR035305 | Herpesvirus glycoprotein H, C-terminal | Domain |














