7YP2 | pdb_00007yp2

Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth L]Proton_antipo_M,Proton_antipo_Ne7yp2L01 A: beta barrelsX: Fe-binding domain in prismane-like proteinsH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Proton_antipo_M,Proton_antipo_NECOD (v294.2)
B [auth H]Proton_antipo_M,Proton_antipo_Ne7yp2H01 A: beta barrelsX: Fe-binding domain in prismane-like proteinsH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Proton_antipo_M,Proton_antipo_NECOD (v294.2)
AProton_antipo_M,Proton_antipo_Ne7yp2A01 A: beta barrelsX: Fe-binding domain in prismane-like proteinsH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Proton_antipo_M,Proton_antipo_NECOD (v294.2)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth L]Light ChainIGKV8 Kappaenvelope glycoprotein hSAbDab (2026-05-08)
B [auth H]Heavy ChainIGHV4 -envelope glycoprotein hSAbDab (2026-05-08)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17488Herpesvirus glycoprotein H C-terminal domain (Herpes_glycoH_C)Herpesvirus glycoprotein H C-terminal domainHerpesvirus glycoprotein H (gH) is a virion associated envelope glycoprotein [2]. Complex formation between gH and gL has been demonstrated in both virions and infected cells [1]. This entry represents the C-terminal domain. Domain
PF02489Herpesvirus glycoprotein H main domain (Herpes_glycop_H)Herpesvirus glycoprotein H main domainHerpesvirus glycoprotein H (gH) is a virion associated envelope glycoprotein [2]. Complex formation between gH and gL has been demonstrated in both virions and infected cells [1]. Domain