7W5Z
Cryo-EM structure of Tetrahymena thermophila mitochondrial complex IV, composite dimer model
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
R [auth M1] | Mito_carr | e7w5zM11 | A: alpha complex topology | X: Mitochondrial ADP/ATP carrier-like | H: Mitochondrial ADP/ATP carrier (From Topology) | T: Mitochondrial ADP/ATP carrier | F: Mito_carr | ECOD (1.6) |
XB [auth m1] | Mito_carr | e7w5zm11 | A: alpha complex topology | X: Mitochondrial ADP/ATP carrier-like | H: Mitochondrial ADP/ATP carrier (From Topology) | T: Mitochondrial ADP/ATP carrier | F: Mito_carr | ECOD (1.6) |
S [auth M2] | Mito_carr | e7w5zM21 | A: alpha complex topology | X: Mitochondrial ADP/ATP carrier-like | H: Mitochondrial ADP/ATP carrier (From Topology) | T: Mitochondrial ADP/ATP carrier | F: Mito_carr | ECOD (1.6) |
YB [auth m2] | Mito_carr | e7w5zm21 | A: alpha complex topology | X: Mitochondrial ADP/ATP carrier-like | H: Mitochondrial ADP/ATP carrier (From Topology) | T: Mitochondrial ADP/ATP carrier | F: Mito_carr | ECOD (1.6) |
BC [auth t2] | zf-Tim10_DDP | e7w5zt21 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
V [auth T2] | zf-Tim10_DDP | e7w5zT21 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
CC [auth t3] | zf-Tim10_DDP | e7w5zt31 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
W [auth T3] | zf-Tim10_DDP | e7w5zT31 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
FC [auth t6] | F_UNCLASSIFIED | e7w5zt61 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: F_UNCLASSIFIED | ECOD (1.6) |
Z [auth T6] | F_UNCLASSIFIED | e7w5zT61 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: F_UNCLASSIFIED | ECOD (1.6) |
GC [auth bp] | RCC1 | e7w5zbp1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: RCC1 | ECOD (1.6) |
AA [auth BP] | RCC1 | e7w5zBP1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: RCC1 | ECOD (1.6) |
IC [auth ac] | F_UNCLASSIFIED | e7w5zac1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: F_UNCLASSIFIED | ECOD (1.6) |
CA [auth AC] | F_UNCLASSIFIED | e7w5zAC1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
J [auth 5B], PB [auth 5b] | PF01215 | Cytochrome c oxidase subunit Vb (COX5B) | Cytochrome c oxidase subunit Vb | - | Domain |
R [auth M1], XB [auth m1] | PF00153 | Mitochondrial carrier protein (Mito_carr) | Mitochondrial carrier protein | - | Repeat |
S [auth M2], YB [auth m2] | PF00153 | Mitochondrial carrier protein (Mito_carr) | Mitochondrial carrier protein | - | Repeat |
T [auth M3], ZB [auth m3] | PF00153 | Mitochondrial carrier protein (Mito_carr) | Mitochondrial carrier protein | - | Repeat |
AC [auth t1], U [auth T1] | PF02953 | Tim10/DDP family zinc finger (zf-Tim10_DDP) | Tim10/DDP family zinc finger | Putative zinc binding domain with four conserved cysteine residues. This domain is found in the human disease protein Swiss:O60220. Members of this family such as Tim9 and Tim10 are involved in mitochondrial protein import [1]. Members of thi ... | Domain |
AA [auth BP], GC [auth bp] | PF00415 | Regulator of chromosome condensation (RCC1) repeat (RCC1) | Regulator of chromosome condensation (RCC1) repeat | - | Repeat |
JA [auth D], OC [auth d] | PF02104 | SURF1 family (SURF1) | SURF1 family | - | Family |
G [auth C1], MB [auth c1] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
H [auth C2], NB [auth c2] | PF00116 | Cytochrome C oxidase subunit II, periplasmic domain (COX2) | Cytochrome C oxidase subunit II, periplasmic domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
A [auth U1], GB [auth u1] | UNK | |
J [auth 5B], PB [auth 5b] | SEP | Parent Component: SER :  AA0037 :  O-phospho-L-serine MOD:00046 |
J [auth 5B], PB [auth 5b] | TPO | Parent Component: THR :  AA0037 , AA0038 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 |
M [auth 6L], SB [auth 6l] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
O [auth 7A], UB [auth 7a] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
P [auth 7C], VB [auth 7c] | SEP | Parent Component: SER :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046 |
S [auth M2], YB [auth m2] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
DC [auth t4], X [auth T4] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
FC [auth t6], Z [auth T6] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
C [auth U3], IB [auth u3] | UNK | AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 | : 
EA [auth Y0], KC [auth y0] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
KA [auth E], PC [auth e] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
D [auth U4], JB [auth u4] | UNK | AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 | : 
AD [auth p], VA [auth P] | FME | Parent Component: MET :  AA0037 , AA0038 , AA0021 , AA0566 , AA0021 , AA0566 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566 :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |