CryoEM structure of Methylotuvimicrobium alcaliphilum 20Z pMMO in a POPC nanodisc at 2.46 Angstrom resolution
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Monooxygenase subunit B C-terminal domain-like | 8095950 | 3002712 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Monooxygenase subunit B transmembrane domain-like | 8095949 | 3002711 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | PapD-like | 8095948 | 3002067 | SCOP2B (2021-05-27) |
H [auth D] | SCOP2B Superfamily | Monooxygenase subunit B transmembrane domain-like | 8095949 | 3002711 | SCOP2B (2021-05-27) |
H [auth D] | SCOP2B Superfamily | PapD-like | 8095948 | 3002067 | SCOP2B (2021-05-27) |
H [auth D] | SCOP2B Superfamily | Monooxygenase subunit B C-terminal domain-like | 8095950 | 3002712 | SCOP2B (2021-05-27) |
I [auth E] | SCOP2B Superfamily | Monooxygenase subunit B transmembrane domain-like | 8095949 | 3002711 | SCOP2B (2021-05-27) |
I [auth E] | SCOP2B Superfamily | PapD-like | 8095948 | 3002067 | SCOP2B (2021-05-27) |
I [auth E] | SCOP2B Superfamily | Monooxygenase subunit B C-terminal domain-like | 8095950 | 3002712 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Gx transporter-like | 8095954 | 3002268 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Gx transporter-like | 8095954 | 3002268 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | Gx transporter-like | 8095954 | 3002268 | SCOP2B (2021-05-27) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF04744 | e7s4lA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF04744 | ECOD (1.6) |
A | PF04744 | e7s4lA1 | A: alpha bundles | X: Long alpha-hairpin | H: PmoB helical hairpin (From Topology) | T: PmoB helical hairpin | F: PF04744 | ECOD (1.6) |
H [auth D] | PF04744 | e7s4lD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF04744 | ECOD (1.6) |
H [auth D] | PF04744 | e7s4lD2 | A: alpha bundles | X: Long alpha-hairpin | H: PmoB helical hairpin (From Topology) | T: PmoB helical hairpin | F: PF04744 | ECOD (1.6) |
I [auth E] | PF04744 | e7s4lE3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF04744 | ECOD (1.6) |
I [auth E] | PF04744 | e7s4lE1 | A: alpha bundles | X: Long alpha-hairpin | H: PmoB helical hairpin (From Topology) | T: PmoB helical hairpin | F: PF04744 | ECOD (1.6) |
B | PF02461 | e7s4lB1 | A: alpha bundles | X: PmoA (From Topology) | H: PmoA (From Topology) | T: PmoA | F: PF02461 | ECOD (1.6) |
F | PF02461 | e7s4lF1 | A: alpha bundles | X: PmoA (From Topology) | H: PmoA (From Topology) | T: PmoA | F: PF02461 | ECOD (1.6) |
G | PF02461 | e7s4lG1 | A: alpha bundles | X: PmoA (From Topology) | H: PmoA (From Topology) | T: PmoA | F: PF02461 | ECOD (1.6) |
C | PF04896 | e7s4lC1 | A: alpha bundles | X: STAT-like | H: Ammonia monooxygenase subunit C (From Topology) | T: Ammonia monooxygenase subunit C | F: PF04896 | ECOD (1.6) |
D [auth H] | PF04896 | e7s4lH1 | A: alpha bundles | X: STAT-like | H: Ammonia monooxygenase subunit C (From Topology) | T: Ammonia monooxygenase subunit C | F: PF04896 | ECOD (1.6) |
E [auth I] | PF04896 | e7s4lI1 | A: alpha bundles | X: STAT-like | H: Ammonia monooxygenase subunit C (From Topology) | T: Ammonia monooxygenase subunit C | F: PF04896 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
A, H [auth D], I [auth E] | Particulate methane monooxygenase, B subunit | | - | - |
| Particulate methane monooxygenase, A subunit | - | - | |
C, D [auth H], E [auth I] | Particulate methane monooxygenase, C subunit | - | - | |
Chains | Accession | Name | Type |
---|
A, H [auth D], I [auth E] | IPR006833 | Ammonia monooxygenase/particulate methane monooxygenase, subunit B | Family |
A, H [auth D], I [auth E] | IPR023141 | Ammonia/methane monooxygenase, subunit B, hairpin domain superfamily | Homologous Superfamily |
A, H [auth D], I [auth E] | IPR023303 | Ammonia/methane monooxygenase, subunit B, C-terminal | Homologous Superfamily |
A, H [auth D], I [auth E] | IPR023301 | Ammonia/methane monooxygenase, subunitB, N-terminal | Homologous Superfamily |
| IPR037001 | Ammonia/particulate methane monooxygenase, subunit A superfamily | Homologous Superfamily |
| IPR003393 | Ammonia monooxygenase/particulate methane monooxygenase, subunit A | Family |
C, D [auth H], E [auth I] | IPR006980 | Ammonia monooxygenase/particulate methane monooxygenase, subunit C | Family |
C, D [auth H], E [auth I] | IPR023349 | Ammonia monooxygenase/particulate methane monooxygenase, subunit C domain superfamily | Homologous Superfamily |