7QD4
Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 100 bp long transposon end DNA
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, F [auth D] | PF01526 | Tn3 transposase DDE domain (DDE_Tnp_Tn3) | Tn3 transposase DDE domain | This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu ... | Domain |
A, F [auth D] | PF13700 | Domain of unknown function (DUF4158) (DUF4158) | Domain of unknown function (DUF4158) | The exact function of this domain is not clear, but it frequently occurs as an N-terminal region of transposase 3 or IS3 family of insertion elements. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, F [auth D] | Transposase for transposon Tn4430 | - | ||
B, D [auth E] | IR100 DNA substrate, none transferred strand | - | - | - |
C, E [auth F] | IR100 DNA substrate, transferred strand | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, F [auth D] | IPR047653 | Tn3-like transposase | Family |
A, F [auth D] | IPR025296 | Domain of unknown function DUF4158 | Domain |
A, F [auth D] | IPR002513 | Tn3 transposase DDE domain | Domain |