7KO8
Cryo-EM structure of the mature and infective Mayaro virus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trypsin-like serine proteases | 8104185 | 3000114 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Trypsin-like serine proteases | 8104185 | 3000114 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Trypsin-like serine proteases | 8104185 | 3000114 | SCOP2B (2022-06-29) |
J | SCOP2 Family | Viral capsid proteases-like | 8104184 | 4002263 | SCOP2 (2022-06-29) |
J | SCOP2 Superfamily | Trypsin-like serine proteases | 8104185 | 3000114 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Alpha_E1_glycop_2nd | e7ko8B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Alpha_E1_glycop_2nd | ECOD (1.6) |
B | Alpha_E1_glycop_1st | e7ko8B2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Alpha_E1_glycop_1st | ECOD (1.6) |
B | Alpha_E1_glycop_like | e7ko8B3 | A: extended segments | X: Transmembrane helix of E1 envelope glycoprotein (From Topology) | H: Transmembrane helix of E1 envelope glycoprotein (From Topology) | T: Transmembrane helix of E1 envelope glycoprotein | F: Alpha_E1_glycop_like | ECOD (1.6) |
E | Alpha_E1_glycop_2nd | e7ko8E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Alpha_E1_glycop_2nd | ECOD (1.6) |
E | Alpha_E1_glycop_1st | e7ko8E2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Alpha_E1_glycop_1st | ECOD (1.6) |
E | Alpha_E1_glycop_like | e7ko8E3 | A: extended segments | X: Transmembrane helix of E1 envelope glycoprotein (From Topology) | H: Transmembrane helix of E1 envelope glycoprotein (From Topology) | T: Transmembrane helix of E1 envelope glycoprotein | F: Alpha_E1_glycop_like | ECOD (1.6) |
H | Alpha_E1_glycop_2nd | e7ko8H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Alpha_E1_glycop_2nd | ECOD (1.6) |
H | Alpha_E1_glycop_1st | e7ko8H2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Alpha_E1_glycop_1st | ECOD (1.6) |
H | Alpha_E1_glycop_like | e7ko8H3 | A: extended segments | X: Transmembrane helix of E1 envelope glycoprotein (From Topology) | H: Transmembrane helix of E1 envelope glycoprotein (From Topology) | T: Transmembrane helix of E1 envelope glycoprotein | F: Alpha_E1_glycop_like | ECOD (1.6) |
K [auth L] | Alpha_E1_glycop_2nd | e7ko8L2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Alpha_E1_glycop_2nd | ECOD (1.6) |
K [auth L] | Alpha_E1_glycop_1st | e7ko8L1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Alpha_E1_glycop_1st | ECOD (1.6) |
K [auth L] | Alpha_E1_glycop_like | e7ko8L3 | A: extended segments | X: Transmembrane helix of E1 envelope glycoprotein (From Topology) | H: Transmembrane helix of E1 envelope glycoprotein (From Topology) | T: Transmembrane helix of E1 envelope glycoprotein | F: Alpha_E1_glycop_like | ECOD (1.6) |
A | Peptidase_S3 | e7ko8A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Peptidase_S3 | ECOD (1.6) |
D | Peptidase_S3 | e7ko8D1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Peptidase_S3 | ECOD (1.6) |
G | Peptidase_S3 | e7ko8G1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Peptidase_S3 | ECOD (1.6) |
J | Peptidase_S3 | e7ko8J1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Peptidase_S3 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B, E, H, K [auth L] | PF01589 | Alphavirus E1 glycoprotein (Alpha_E1_glycop) | Alphavirus E1 glycoprotein | - | Family |
C, F, I, L [auth M] | PF00943 | Alphavirus E2 glycoprotein (Alpha_E2_glycop) | Alphavirus E2 glycoprotein | - | Family |