7FDL

Crystal structure of transcription factor WER in complex with EGL3

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	bHLH-MYC_N	e7fdlA1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: bHLH-MYC_N	ECOD (1.6)
C	bHLH-MYC_N	e7fdlC1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: bHLH-MYC_N	ECOD (1.6)
E	bHLH-MYC_N	e7fdlE1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: bHLH-MYC_N	ECOD (1.6)
G	bHLH-MYC_N	e7fdlG1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: bHLH-MYC_N	ECOD (1.6)
I	bHLH-MYC_N	e7fdlI1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: bHLH-MYC_N	ECOD (1.6)
K	bHLH-MYC_N	e7fdlK1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: bHLH-MYC_N	ECOD (1.6)
B	Myb_DNA-binding_2	e7fdlB1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_2	ECOD (1.6)
D	Myb_DNA-binding_2	e7fdlD1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_2	ECOD (1.6)
F	Myb_DNA-binding_2	e7fdlF1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_2	ECOD (1.6)
H	Myb_DNA-binding_2	e7fdlH1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_2	ECOD (1.6)
J	Myb_DNA-binding_2	e7fdlJ1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Myb_DNA-binding_2	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C, E, G, I A, C, E, G, I, K	PF14215	bHLH-MYC and R2R3-MYB transcription factors N-terminal (bHLH-MYC_N)	bHLH-MYC and R2R3-MYB transcription factors N-terminal	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C, E, G, I A, C, E, G, I, K	Transcription factor EGL1	DNA binding binding organic cyclic compound binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity protein binding protein dimerization activity	cellular response to stimulus regulation of cellular process response to lipid response to stimulus signaling hormone-mediated signaling pathway cell communication cellular response to endogenous stimulus cellular response to jasmonic acid stimulus response to hormone signal transduction cellular response to hormone stimulus regulation of biological process response to jasmonic acid cellular response to stimulus regulation of cellular process response to lipid response to stimulus signaling hormone-mediated signaling pathway cell communication cellular response to endogenous stimulus cellular response to jasmonic acid stimulus response to hormone signal transduction cellular response to hormone stimulus regulation of biological process response to jasmonic acid response to fatty acid response to endogenous stimulus biological regulation response to oxygen-containing compound jasmonic acid mediated signaling pathway cellular response to oxygen-containing compound cellular response to fatty acid cellular response to chemical stimulus response to chemical cellular response to lipid cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process cellular metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process developmental process cellular developmental process trichome differentiation cell differentiation plant epidermis development anatomical structure development tissue development epithelium development epidermal cell differentiation epidermis development cell fate specification epithelial cell differentiation cell fate commitment epidermal cell fate specification	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle cellular anatomical entity
B, D, F, H, J B, D, F, H, J, L	Transcription factor WER	DNA binding binding organic cyclic compound binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	multicellular organismal process plant epidermal cell differentiation cellular developmental process plant epidermis development cell development multicellular organism development cell differentiation anatomical structure development cell maturation root development trichoblast differentiation system development developmental process plant organ development multicellular organismal process plant epidermal cell differentiation cellular developmental process plant epidermis development cell development multicellular organism development cell differentiation anatomical structure development cell maturation root development trichoblast differentiation system development developmental process plant organ development root morphogenesis root epidermal cell differentiation root hair cell differentiation developmental maturation tissue development plant organ morphogenesis anatomical structure morphogenesis trichoblast maturation anatomical structure maturation cellular process root system development cell fate commitment regulation of cellular process positive regulation of DNA-templated transcription cellular biosynthetic process positive regulation of biological process RNA metabolic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process positive regulation of nucleobase-containing compound metabolic process cellular metabolic process biological regulation primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process positive regulation of cellular biosynthetic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C, E, G, I A, C, E, G, I, K	IPR025610	Transcription factor MYC/MYB N-terminal	Domain
A, C, E, G, I A, C, E, G, I, K	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	Domain
A, C, E, G, I A, C, E, G, I, K	IPR036638	Helix-loop-helix DNA-binding domain superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L	IPR009057	Homedomain-like superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L	IPR001005	SANT/Myb domain	Domain
B, D, F, H, J B, D, F, H, J, L	IPR017930	Myb domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.