7DWN

Crystal structure of Vibrio fischeri DarR in complex with DNA reveals the transcriptional activation mechanism of LTTR family members


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHTH_1e7dwnA2 A: alpha arraysX: HTHH: HTHT: wingedF: HTH_1ECOD (1.6)
ALysR_substratee7dwnA1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: LysR_substrateECOD (1.6)
CHTH_1e7dwnC2 A: alpha arraysX: HTHH: HTHT: wingedF: HTH_1ECOD (1.6)
CLysR_substratee7dwnC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: LysR_substrateECOD (1.6)
DHTH_1e7dwnD2 A: alpha arraysX: HTHH: HTHT: wingedF: HTH_1ECOD (1.6)
DLysR_substratee7dwnD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: LysR_substrateECOD (1.6)
BHTH_1e7dwnB1 A: alpha arraysX: HTHH: HTHT: wingedF: HTH_1ECOD (1.6)
BLysR_substratee7dwnB2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: LysR_substrateECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF03466LysR substrate binding domain (LysR_substrate)LysR substrate binding domain- Family
A, B, C, D
PF00126Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1)Bacterial regulatory helix-turn-helix protein, lysR family- Domain