7D7E
Structure of PKD1L3-CTD/PKD2L1 in apo state
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF08016 | e7d7eB2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF08016 | ECOD (1.6) |
A [auth B] | PF20519 | e7d7eB1 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: PF20519 | ECOD (1.6) |
B [auth C] | PF08016 | e7d7eC1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF08016 | ECOD (1.6) |
B [auth C] | PF20519 | e7d7eC2 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: PF20519 | ECOD (1.6) |
C [auth D] | PF08016 | e7d7eD2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF08016 | ECOD (1.6) |
C [auth D] | PF20519 | e7d7eD1 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: PF20519 | ECOD (1.6) |
D [auth A] | PF08016 | e7d7eA2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF08016 | ECOD (1.6) |
D [auth A] | PF20519 | e7d7eA1 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: PF20519 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth C], C [auth D] | PF08016 | Polycystin cation channel (PKD_channel) | Polycystin cation channel | - | Family |
A [auth B], B [auth C], C [auth D] | PF20519 | Polycystin domain (Polycystin_dom) | Polycystin domain | This domain represents the polycystin domain from group II of Transient receptor potential (TRP) channels (TRPP) including PKD1, PKD2, PKD2L and mucolipins. The polycystin domain display a sandwich-like shape with five beta-sheets in the tilted middl ... | Domain |
A [auth B], B [auth C], C [auth D] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
D [auth A] | PF08016 | Polycystin cation channel (PKD_channel) | Polycystin cation channel | - | Family |
D [auth A] | PF20519 | Polycystin domain (Polycystin_dom) | Polycystin domain | This domain represents the polycystin domain from group II of Transient receptor potential (TRP) channels (TRPP) including PKD1, PKD2, PKD2L and mucolipins. The polycystin domain display a sandwich-like shape with five beta-sheets in the tilted middl ... | Domain |
D [auth A] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Polycystin cation channel |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |