Annotations: 7AE7

Structure of Sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (ShVdcCD) in open form, with truncated ShVdcD (V59X)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L [auth f]	Lant_dehydr_C	e7ae7f1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lant_dehydr_C	ECOD (v294.2)
K [auth e]	Lant_dehydr_C	e7ae7e1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lant_dehydr_C	ECOD (v294.2)
J [auth d]	Lant_dehydr_C	e7ae7d1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lant_dehydr_C	ECOD (v294.2)
I [auth c]	Lant_dehydr_C	e7ae7c1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lant_dehydr_C	ECOD (v294.2)
H [auth b]		e7ae7b1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F:	ECOD (v294.2)
G [auth a]	Lant_dehydr_C	e7ae7a1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lant_dehydr_C	ECOD (v294.2)
F	UbiD_N	e7ae7F1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: UbiD_N	ECOD (v294.2)
E	UbiD_N	e7ae7E1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: UbiD_N	ECOD (v294.2)
D	UbiD_N	e7ae7D1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: UbiD_N	ECOD (v294.2)
C	UbiD_N	e7ae7C1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: UbiD_N	ECOD (v294.2)
B	UbiD_N	e7ae7B1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: UbiD_N	ECOD (v294.2)
A	UbiD_N	e7ae7A1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: UbiD_N	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth a], H [auth b], I [auth c], J [auth d], K [auth e], G [auth a], H [auth b], I [auth c], J [auth d], K [auth e], L [auth f]	Protein ShdD	-	response to stimulus response to chemical response to toxic substance	-
A, B, C, D, E A, B, C, D, E, F	Phenolic acid decarboxylase	4-hydroxybenzoate decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity protocatechuate decarboxylase activity 4-hydroxy-3-polyprenylbenzoate decarboxylase activity cation binding ion binding binding metal ion binding small molecule binding	response to stimulus response to chemical response to toxic substance small molecule biosynthetic process ketone metabolic process ubiquinone biosynthetic process quinone metabolic process biosynthetic process quinone biosynthetic process metabolic process cellular process small molecule metabolic process ubiquinone metabolic process ketone biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G [auth a], H [auth b], I [auth c], J [auth d], K [auth e], G [auth a], H [auth b], I [auth c], J [auth d], K [auth e], L [auth f]	IPR047707	Phenolic acid decarboxylase VdcD-like	Family
A, B, C, D, E A, B, C, D, E, F	IPR048304	3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR002830	UbiD decarboxylyase family	Family
A, B, C, D, E A, B, C, D, E, F	IPR049381	3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR053417	Phenolic Acid Decarboxylase UbiD-like	Family
A, B, C, D, E A, B, C, D, E, F	IPR049383	3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR032902	Phenolic acid decarboxylase subunit C	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7AE7 | pdb_00007ae7

Structure of Sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (ShVdcCD) in open form, with truncated ShVdcD (V59X)

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage